RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 SNAPC3Q92966 411 aa14.08□□□□□ -0.15
EFNB1-201ENST00000204961 SENP5Q96HI0 755 aaPredicted RBP14.08□□□□□ -0.15
EFNB1-201ENST00000204961 RNF121Q9H920 327 aa14.08□□□□□ -0.15
EFNB1-201ENST00000204961 CACYBPQ9HB71 228 aaKnown RBP14.08□□□□□ -0.15
EFNB1-201ENST00000204961 TBC1D29Q9UFV1 150 aa14.08□□□□□ -0.15
EFNB1-201ENST00000204961 ERVH48-1M5A8F1 160 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 LGI1O95970 557 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 RPS27P42677 84 aaKnown RBP14.08□□□□□ -0.16
EFNB1-201ENST00000204961 CCR4P51679 360 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 TP53I3Q53FA7 332 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 RAB42Q8N4Z0 105 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 DEFB119Q8N690 84 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 MORN4Q8NDC4 146 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 GRPEL2Q8TAA5 225 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 ZMYND19Q96E35 227 aaPredicted RBP14.08□□□□□ -0.16
EFNB1-201ENST00000204961 OMA1Q96E52 524 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 SLC41A3Q96GZ6 507 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 ZNF514Q96K75 400 aaPredicted RBP14.08□□□□□ -0.16
EFNB1-201ENST00000204961 PLA2G2FQ9BZM2 168 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 KCMF1Q9P0J7 381 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 KCND3Q9UK17 655 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 MPDZO75970 2070 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 A0A1W2PQ72 361 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 RGS13O14921 159 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 POLR1CO15160 346 aaPredicted RBP14.08□□□□□ -0.16
EFNB1-201ENST00000204961 CTSBP07858 339 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 GJA4P35212 333 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 PPP1CAP62136 330 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 PRR5P85299 388 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 KRR1Q13601 381 aaKnown RBP14.08□□□□□ -0.16
EFNB1-201ENST00000204961 DUSP5Q16690 384 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 KIAA1324Q6UXG2 1013 aaKnown RBP14.08□□□□□ -0.16
EFNB1-201ENST00000204961 RNF44Q7L0R7 432 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 NRSN1Q8IZ57 195 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 RFLNBQ8N5W9 214 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 UXS1Q8NBZ7 420 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 OR5H6Q8NGV6 325 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 TMEM163Q8TC26 289 aa14.08□□□□□ -0.16
EFNB1-201ENST00000204961 ZNF707Q96C28 371 aaPredicted RBP14.08□□□□□ -0.16
EFNB1-201ENST00000204961 PRODHO43272 600 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 ELK1P19419 428 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 SSTR2P30874 369 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 MAP2K3P46734 347 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 OR12D2P58182 307 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 SMIM11AP58511 58 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 ABHD17CQ6PCB6 329 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 GDF7Q7Z4P5 450 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 PRRC1Q96M27 445 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 CHIAQ9BZP6 476 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 ICKQ9UPZ9 632 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 RPN2P04844 631 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 EVI2BP34910 448 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 SNRPGP62308 76 aaKnown RBP14.07□□□□□ -0.16
EFNB1-201ENST00000204961 ARHGEF6Q15052 776 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 KLHL22Q53GT1 634 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 CXXC5Q7LFL8 322 aaKnown RBP14.07□□□□□ -0.16
EFNB1-201ENST00000204961 C10orf53Q8N6V4 93 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 SLC37A3Q8NCC5 494 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 OR4K13Q8NH42 304 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 OR8K3Q8NH51 312 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 POP5Q969H6 163 aaKnown RBP14.07□□□□□ -0.16
EFNB1-201ENST00000204961 ELP4Q96EB1 424 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 ARPC5LQ9BPX5 153 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 NXF2Q9GZY0 626 aaKnown RBP14.07□□□□□ -0.16
EFNB1-201ENST00000204961 TMEM168Q9H0V1 697 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 C3orf14Q9HBI5 128 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 PHPT1Q9NRX4 125 aaPredicted RBP14.07□□□□□ -0.16
EFNB1-201ENST00000204961 RASD1Q9Y272 281 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 WDFY4Q6ZS81 3184 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 C4orf47A7E2U8 309 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 VEGFDO43915 354 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 RPP14O95059 124 aaKnown RBP14.07□□□□□ -0.16
EFNB1-201ENST00000204961 NFATC1O95644 943 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 THY1P04216 161 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 BMP7P18075 431 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 TRAM2Q15035 370 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 WDR45BQ5MNZ6 344 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 THSD4Q6ZMP0 1018 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 IKBIPQ70UQ0 350 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 ZAR1Q86SH2 424 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 RASGRP3Q8IV61 690 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 OR2L3Q8NG85 312 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 SLC7A6Q92536 515 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 POLDIP3Q9BY77 421 aaKnown RBP14.07□□□□□ -0.16
EFNB1-201ENST00000204961 PRDM7Q9NQW5 492 aa14.07□□□□□ -0.16
EFNB1-201ENST00000204961 SERTM1A2A2V5 107 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 A8MVJ9 347 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 RAD1O60671 282 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 PPP1R3DO95685 299 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 ACP2P11117 423 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 LAMP2P13473 410 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 REEP5Q00765 189 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 ST3GAL3Q11203 375 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 FAM205BPQ63HN1 556 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 CEACAM19Q7Z692 300 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 NOXA1Q86UR1 476 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 NR2C2APQ86WQ0 139 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 ZNF784Q8NCA9 323 aaPredicted RBP14.06□□□□□ -0.16
EFNB1-201ENST00000204961 SRMSQ9H3Y6 488 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 DIMT1Q9UNQ2 313 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms