RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 ISCA1Q9BUE6 129 aa9.37□□□□□ -0.91
PTP4A1-206ENST00000627002 PNMA6EA0A0J9YXQ4 647 aa9.36□□□□□ -0.91
PTP4A1-206ENST00000627002 ATP5J2-PTCD1G3V325 749 aa9.36□□□□□ -0.91
PTP4A1-206ENST00000627002 SRGAP3O43295 1099 aa9.36□□□□□ -0.91
PTP4A1-206ENST00000627002 RAB11FIP3O75154 756 aa9.36□□□□□ -0.91
PTP4A1-206ENST00000627002 HSP90AB4PQ58FF6 505 aa9.36□□□□□ -0.91
PTP4A1-206ENST00000627002 PPP1R42Q7Z4L9 355 aa9.36□□□□□ -0.91
PTP4A1-206ENST00000627002 SUCLG2Q96I99 432 aa9.36□□□□□ -0.91
PTP4A1-206ENST00000627002 ARXQ96QS3 562 aa9.36□□□□□ -0.91
PTP4A1-206ENST00000627002 CCNL1Q9UK58 526 aaPredicted RBP9.36□□□□□ -0.91
PTP4A1-206ENST00000627002 RREB1Q92766 1687 aa9.36□□□□□ -0.91
PTP4A1-206ENST00000627002 ARFGEF2Q9Y6D5 1785 aa9.35□□□□□ -0.91
PTP4A1-206ENST00000627002 H7C1W4 665 aa9.35□□□□□ -0.91
PTP4A1-206ENST00000627002 RGL2O15211 777 aa9.35□□□□□ -0.91
PTP4A1-206ENST00000627002 PTF1AQ7RTS3 328 aa9.35□□□□□ -0.91
PTP4A1-206ENST00000627002 UBE3BQ7Z3V4 1068 aa9.35□□□□□ -0.91
PTP4A1-206ENST00000627002 SKAP1Q86WV1 359 aa9.35□□□□□ -0.91
PTP4A1-206ENST00000627002 LINC00116Q8NCU8 138 aa9.35□□□□□ -0.91
PTP4A1-206ENST00000627002 LNPKQ9C0E8 428 aa9.35□□□□□ -0.91
PTP4A1-206ENST00000627002 BICC1Q9H694 974 aaKnown RBP9.35□□□□□ -0.91
PTP4A1-206ENST00000627002 TSHZ2Q9NRE2 1034 aa9.35□□□□□ -0.91
PTP4A1-206ENST00000627002 NUP188Q5SRE5 1749 aa9.34□□□□□ -0.91
PTP4A1-206ENST00000627002 SPDYE4A6NLX3 237 aa9.34□□□□□ -0.91
PTP4A1-206ENST00000627002 PCCAP05165 728 aaPredicted RBP9.34□□□□□ -0.91
PTP4A1-206ENST00000627002 PDE4AP27815 886 aa9.34□□□□□ -0.91
PTP4A1-206ENST00000627002 CASP7P55210 303 aa9.34□□□□□ -0.91
PTP4A1-206ENST00000627002 SLC27A3Q5K4L6 730 aa9.34□□□□□ -0.91
PTP4A1-206ENST00000627002 LRRCC1Q9C099 1032 aa9.34□□□□□ -0.91
PTP4A1-206ENST00000627002 ZNF652Q9Y2D9 606 aa9.34□□□□□ -0.91
PTP4A1-206ENST00000627002 BTAF1O14981 1849 aa9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 RPS6KA4O75676 772 aa9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 SURF6O75683 361 aaKnown RBP9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 CAMTA2O94983 1202 aa9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 HLFQ16534 295 aa9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 FAM161AQ3B820 660 aa9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 RABL6Q3YEC7 729 aaPredicted RBP9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 CLEC4GQ6UXB4 293 aa9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 NLRP10Q86W26 655 aa9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 ERC1Q8IUD2 1116 aa9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 ZBTB38Q8NAP3 1195 aaPredicted RBP9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 KAZALD1Q96I82 304 aa9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 TBC1D2BQ9UPU7 963 aa9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 EXOC6BQ9Y2D4 811 aa9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 NOP58Q9Y2X3 529 aaKnown RBP9.33□□□□□ -0.92
PTP4A1-206ENST00000627002 LRP5O75197 1615 aa9.32□□□□□ -0.92
PTP4A1-206ENST00000627002 TRIM37O94972 964 aa9.32□□□□□ -0.92
PTP4A1-206ENST00000627002 PRKAR2AP13861 404 aaKnown RBP9.32□□□□□ -0.92
PTP4A1-206ENST00000627002 EN1Q05925 392 aaPredicted RBP9.32□□□□□ -0.92
PTP4A1-206ENST00000627002 R3HDM1Q15032 1099 aaKnown RBP9.32□□□□□ -0.92
PTP4A1-206ENST00000627002 PARP10Q53GL7 1025 aa9.32□□□□□ -0.92
PTP4A1-206ENST00000627002 ZNF34Q8IZ26 560 aa9.32□□□□□ -0.92
PTP4A1-206ENST00000627002 KIF1BPQ96EK5 621 aa9.32□□□□□ -0.92
PTP4A1-206ENST00000627002 RTCBQ9Y3I0 505 aaKnown RBP9.32□□□□□ -0.92
PTP4A1-206ENST00000627002 CDHR2Q9BYE9 1310 aa9.31□□□□□ -0.92
PTP4A1-206ENST00000627002 COL5A3P25940 1745 aaPredicted RBP9.31□□□□□ -0.92
PTP4A1-206ENST00000627002 APBB1O00213 710 aa9.31□□□□□ -0.92
PTP4A1-206ENST00000627002 GNPATO15228 680 aa9.31□□□□□ -0.92
PTP4A1-206ENST00000627002 HSP90B1P14625 803 aaKnown RBP9.31□□□□□ -0.92
PTP4A1-206ENST00000627002 FOXO4P98177 505 aa9.31□□□□□ -0.92
PTP4A1-206ENST00000627002 OS9Q13438 667 aaPredicted RBP9.31□□□□□ -0.92
PTP4A1-206ENST00000627002 AK7Q96M32 723 aa9.31□□□□□ -0.92
PTP4A1-206ENST00000627002 PLA2G12BQ9BX93 195 aa9.31□□□□□ -0.92
PTP4A1-206ENST00000627002 BACH2Q9BYV9 841 aa9.31□□□□□ -0.92
PTP4A1-206ENST00000627002 GPTP24298 496 aa9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 YY1P25490 414 aa9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 KCNQ4P56696 695 aa9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 G3BP1Q13283 466 aaKnown RBP eCLIP9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 BMP2KLQ5H9B9 411 aa9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 EPHA10Q5JZY3 1008 aa9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 CHADLQ6NUI6 762 aa9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 LMBR1LQ6UX01 489 aa9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 PLEKHM2Q8IWE5 1019 aa9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 RHPN1Q8TCX5 695 aa9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 JARID2Q92833 1246 aaPredicted RBP9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 COPRSQ9NQ92 184 aa9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 NARFQ9UHQ1 456 aa9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 TRMT112Q9UI30 125 aaKnown RBP9.3□□□□□ -0.92
PTP4A1-206ENST00000627002 SBF2Q86WG5 1849 aa9.29□□□□□ -0.92
PTP4A1-206ENST00000627002 LY75O60449 1722 aa9.29□□□□□ -0.92
PTP4A1-206ENST00000627002 PLSCR1O15162 318 aa9.29□□□□□ -0.92
PTP4A1-206ENST00000627002 SMARCA5O60264 1052 aaPredicted RBP9.29□□□□□ -0.92
PTP4A1-206ENST00000627002 ZPR1O75312 459 aa9.29□□□□□ -0.92
PTP4A1-206ENST00000627002 RFX5P48382 616 aaPredicted RBP9.29□□□□□ -0.92
PTP4A1-206ENST00000627002 C8orf34Q49A92 452 aa9.29□□□□□ -0.92
PTP4A1-206ENST00000627002 FAM89AQ96GI7 184 aa9.29□□□□□ -0.92
PTP4A1-206ENST00000627002 UTP14AQ9BVJ6 771 aaKnown RBP9.29□□□□□ -0.92
PTP4A1-206ENST00000627002 OSBPL3Q9H4L5 887 aa9.29□□□□□ -0.92
PTP4A1-206ENST00000627002 AOX1Q06278 1338 aa9.29□□□□□ -0.92
PTP4A1-206ENST00000627002 UBN2Q6ZU65 1347 aa9.29□□□□□ -0.92
PTP4A1-206ENST00000627002 AFDNP55196 1824 aaKnown RBP9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 BRWD3Q6RI45 1802 aa9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 IRS4O14654 1257 aaPredicted RBP9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 PDE8AO60658 829 aa9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 APBA3O96018 575 aa9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 CSF1RP07333 972 aa9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 EVX2Q03828 476 aa9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 PTPN12Q05209 780 aaKnown RBP9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 RTL5Q5HYW3 569 aaPredicted RBP9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 TRAPPC3LQ5T215 181 aa9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 C16orf71Q8IYS4 520 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms