RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 G3BP1Q13283 466 aaKnown RBP eCLIP10.16□□□□□ -0.78
BBS4-214ENST00000568535 FAM182BQ5T319 152 aa10.16□□□□□ -0.78
BBS4-214ENST00000568535 ZBTB38Q8NAP3 1195 aaPredicted RBP10.16□□□□□ -0.78
BBS4-214ENST00000568535 KIF1BPQ96EK5 621 aa10.16□□□□□ -0.78
BBS4-214ENST00000568535 TBC1D2BQ9UPU7 963 aa10.16□□□□□ -0.78
BBS4-214ENST00000568535 EXOC6BQ9Y2D4 811 aa10.16□□□□□ -0.78
BBS4-214ENST00000568535 NOP58Q9Y2X3 529 aaKnown RBP10.16□□□□□ -0.78
BBS4-214ENST00000568535 PCCAP05165 728 aaPredicted RBP10.15□□□□□ -0.78
BBS4-214ENST00000568535 RABL6Q3YEC7 729 aaPredicted RBP10.15□□□□□ -0.78
BBS4-214ENST00000568535 PARP10Q53GL7 1025 aa10.15□□□□□ -0.78
BBS4-214ENST00000568535 SLC27A3Q5K4L6 730 aa10.15□□□□□ -0.78
BBS4-214ENST00000568535 CLEC4GQ6UXB4 293 aa10.15□□□□□ -0.78
BBS4-214ENST00000568535 DEFB132Q7Z7B7 95 aa10.15□□□□□ -0.78
BBS4-214ENST00000568535 LINC00116Q8NCU8 138 aa10.15□□□□□ -0.78
BBS4-214ENST00000568535 RBM19Q9Y4C8 960 aaKnown RBP10.15□□□□□ -0.78
BBS4-214ENST00000568535 RPS6KA4O75676 772 aa10.14□□□□□ -0.79
BBS4-214ENST00000568535 CASP7P55210 303 aa10.14□□□□□ -0.79
BBS4-214ENST00000568535 HLFQ16534 295 aa10.14□□□□□ -0.79
BBS4-214ENST00000568535 BMP2KLQ5H9B9 411 aa10.14□□□□□ -0.79
BBS4-214ENST00000568535 NLRP10Q86W26 655 aa10.14□□□□□ -0.79
BBS4-214ENST00000568535 RHPN1Q8TCX5 695 aa10.14□□□□□ -0.79
BBS4-214ENST00000568535 KAZALD1Q96I82 304 aa10.14□□□□□ -0.79
BBS4-214ENST00000568535 AK7Q96M32 723 aa10.14□□□□□ -0.79
BBS4-214ENST00000568535 UPF2Q9HAU5 1272 aaKnown RBP10.14□□□□□ -0.79
BBS4-214ENST00000568535 RTCBQ9Y3I0 505 aaKnown RBP10.14□□□□□ -0.79
BBS4-214ENST00000568535 ZNF831Q5JPB2 1677 aa10.14□□□□□ -0.79
BBS4-214ENST00000568535 NHSQ6T4R5 1651 aa10.14□□□□□ -0.79
BBS4-214ENST00000568535 CICQ96RK0 1608 aaPredicted RBP10.14□□□□□ -0.79
BBS4-214ENST00000568535 TJP1Q07157 1748 aa10.13□□□□□ -0.79
BBS4-214ENST00000568535 CDHR2Q9BYE9 1310 aa10.13□□□□□ -0.79
BBS4-214ENST00000568535 SMARCA5O60264 1052 aaPredicted RBP10.13□□□□□ -0.79
BBS4-214ENST00000568535 ZPR1O75312 459 aa10.13□□□□□ -0.79
BBS4-214ENST00000568535 GPTP24298 496 aa10.13□□□□□ -0.79
BBS4-214ENST00000568535 LMBR1LQ6UX01 489 aa10.13□□□□□ -0.79
BBS4-214ENST00000568535 PLEKHM2Q8IWE5 1019 aa10.13□□□□□ -0.79
BBS4-214ENST00000568535 ZNF34Q8IZ26 560 aa10.13□□□□□ -0.79
BBS4-214ENST00000568535 CLASRPQ8N2M8 674 aaKnown RBP10.13□□□□□ -0.79
BBS4-214ENST00000568535 PLA2G12BQ9BX93 195 aa10.13□□□□□ -0.79
BBS4-214ENST00000568535 BCL11AQ9H165 835 aa10.13□□□□□ -0.79
BBS4-214ENST00000568535 OSBPL3Q9H4L5 887 aa10.13□□□□□ -0.79
BBS4-214ENST00000568535 COPRSQ9NQ92 184 aa10.13□□□□□ -0.79
BBS4-214ENST00000568535 TRMT112Q9UI30 125 aaKnown RBP10.13□□□□□ -0.79
BBS4-214ENST00000568535 ARFGEF2Q9Y6D5 1785 aa10.13□□□□□ -0.79
BBS4-214ENST00000568535 GNPATO15228 680 aa10.12□□□□□ -0.79
BBS4-214ENST00000568535 TRIM37O94972 964 aa10.12□□□□□ -0.79
BBS4-214ENST00000568535 CAMTA2O94983 1202 aa10.12□□□□□ -0.79
BBS4-214ENST00000568535 FOXO4P98177 505 aa10.12□□□□□ -0.79
BBS4-214ENST00000568535 C1QBPQ07021 282 aaKnown RBP10.12□□□□□ -0.79
BBS4-214ENST00000568535 CCDC57Q2TAC2 916 aa10.12□□□□□ -0.79
BBS4-214ENST00000568535 C8orf34Q49A92 452 aa10.12□□□□□ -0.79
BBS4-214ENST00000568535 TRAPPC3LQ5T215 181 aa10.12□□□□□ -0.79
BBS4-214ENST00000568535 PTF1AQ7RTS3 328 aa10.12□□□□□ -0.79
BBS4-214ENST00000568535 JARID2Q92833 1246 aaPredicted RBP10.12□□□□□ -0.79
BBS4-214ENST00000568535 GPATCH3Q96I76 525 aa10.12□□□□□ -0.79
BBS4-214ENST00000568535 UTP14AQ9BVJ6 771 aaKnown RBP10.12□□□□□ -0.79
BBS4-214ENST00000568535 CHMP3Q9Y3E7 222 aa10.12□□□□□ -0.79
BBS4-214ENST00000568535 MX1P20591 662 aa10.11□□□□□ -0.79
BBS4-214ENST00000568535 PDE1AP54750 535 aa10.11□□□□□ -0.79
BBS4-214ENST00000568535 C1QTNF8P60827 252 aa10.11□□□□□ -0.79
BBS4-214ENST00000568535 SF3B2Q13435 895 aaKnown RBP10.11□□□□□ -0.79
BBS4-214ENST00000568535 RTL5Q5HYW3 569 aaPredicted RBP10.11□□□□□ -0.79
BBS4-214ENST00000568535 EPHA10Q5JZY3 1008 aa10.11□□□□□ -0.79
BBS4-214ENST00000568535 CASC1Q6TDU7 716 aa10.11□□□□□ -0.79
BBS4-214ENST00000568535 C16orf71Q8IYS4 520 aaPredicted RBP10.11□□□□□ -0.79
BBS4-214ENST00000568535 FAM89AQ96GI7 184 aa10.11□□□□□ -0.79
BBS4-214ENST00000568535 NARFQ9UHQ1 456 aa10.11□□□□□ -0.79
BBS4-214ENST00000568535 FBXO3Q9UK99 471 aa10.11□□□□□ -0.79
BBS4-214ENST00000568535 NIP7Q9Y221 180 aaKnown RBP eCLIP10.11□□□□□ -0.79
BBS4-214ENST00000568535 NUP188Q5SRE5 1749 aa10.1□□□□□ -0.79
BBS4-214ENST00000568535 AOX1Q06278 1338 aa10.1□□□□□ -0.79
BBS4-214ENST00000568535 SH3TC1Q8TE82 1336 aa10.1□□□□□ -0.79
BBS4-214ENST00000568535 IRS4O14654 1257 aaPredicted RBP10.1□□□□□ -0.79
BBS4-214ENST00000568535 PLSCR1O15162 318 aa10.1□□□□□ -0.79
BBS4-214ENST00000568535 PDE8AO60658 829 aa10.1□□□□□ -0.79
BBS4-214ENST00000568535 IFIT2P09913 472 aaKnown RBP10.1□□□□□ -0.79
BBS4-214ENST00000568535 RFC4P35249 363 aa10.1□□□□□ -0.79
BBS4-214ENST00000568535 ANP32AP39687 249 aaKnown RBP10.1□□□□□ -0.79
BBS4-214ENST00000568535 IFIT5Q13325 482 aaKnown RBP10.1□□□□□ -0.79
BBS4-214ENST00000568535 TAF7LQ5H9L4 462 aa10.1□□□□□ -0.79
BBS4-214ENST00000568535 TTC22Q5TAA0 569 aa10.1□□□□□ -0.79
BBS4-214ENST00000568535 IL1RAPL2Q9NP60 686 aa10.1□□□□□ -0.79
BBS4-214ENST00000568535 STAP2Q9UGK3 403 aa10.1□□□□□ -0.79
BBS4-214ENST00000568535 PA2G4Q9UQ80 394 aaKnown RBP10.1□□□□□ -0.79
BBS4-214ENST00000568535 BTAF1O14981 1849 aa10.1□□□□□ -0.79
BBS4-214ENST00000568535 ERC2O15083 957 aa10.09□□□□□ -0.79
BBS4-214ENST00000568535 CIAO1O76071 339 aa10.09□□□□□ -0.79
BBS4-214ENST00000568535 CSF1RP07333 972 aa10.09□□□□□ -0.79
BBS4-214ENST00000568535 IL15P40933 162 aaPredicted RBP10.09□□□□□ -0.79
BBS4-214ENST00000568535 KCNQ4P56696 695 aa10.09□□□□□ -0.79
BBS4-214ENST00000568535 PTPN12Q05209 780 aaKnown RBP10.09□□□□□ -0.79
BBS4-214ENST00000568535 ZNF784Q8NCA9 323 aaPredicted RBP10.09□□□□□ -0.79
BBS4-214ENST00000568535 SETDB2Q96T68 719 aa10.09□□□□□ -0.79
BBS4-214ENST00000568535 NYXQ9GZU5 481 aa10.09□□□□□ -0.79
BBS4-214ENST00000568535 SIL1Q9H173 461 aa10.09□□□□□ -0.79
BBS4-214ENST00000568535 RREB1Q92766 1687 aa10.09□□□□□ -0.79
BBS4-214ENST00000568535 TTC41PQ6P2S7 1318 aa10.08□□□□□ -0.8
BBS4-214ENST00000568535 AFDNP55196 1824 aaKnown RBP10.08□□□□□ -0.8
BBS4-214ENST00000568535 ANKRD18BA2A2Z9 1011 aa10.08□□□□□ -0.8
BBS4-214ENST00000568535 CDC45O75419 566 aa10.08□□□□□ -0.8
BBS4-214ENST00000568535 APBA3O96018 575 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms