RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 CCDC9Q9Y3X0 531 aaKnown RBP16.33■□□□□ 0.2
BEST1-208ENST00000534553 GIGYF2Q6Y7W6 1299 aaKnown RBP16.32■□□□□ 0.2
BEST1-208ENST00000534553 SMARCC1Q92922 1105 aaPredicted RBP16.32■□□□□ 0.2
BEST1-208ENST00000534553 FBXO3Q9UK99 471 aa16.32■□□□□ 0.2
BEST1-208ENST00000534553 TJP1Q07157 1748 aa16.32■□□□□ 0.2
BEST1-208ENST00000534553 ERVV-1B6SEH8 477 aa16.31■□□□□ 0.2
BEST1-208ENST00000534553 HIP1O00291 1037 aa16.31■□□□□ 0.2
BEST1-208ENST00000534553 ANAPC15P60006 121 aa16.31■□□□□ 0.2
BEST1-208ENST00000534553 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
BEST1-208ENST00000534553 FOXO4P98177 505 aa16.31■□□□□ 0.2
BEST1-208ENST00000534553 LMBR1LQ6UX01 489 aa16.31■□□□□ 0.2
BEST1-208ENST00000534553 FNBP4Q8N3X1 1017 aaPredicted RBP16.31■□□□□ 0.2
BEST1-208ENST00000534553 RUFY2Q8WXA3 655 aa16.31■□□□□ 0.2
BEST1-208ENST00000534553 EVI5LQ96CN4 794 aa16.31■□□□□ 0.2
BEST1-208ENST00000534553 PLA2G12BQ9BX93 195 aa16.31■□□□□ 0.2
BEST1-208ENST00000534553 MARCH10Q8NA82 808 aaPredicted RBP16.3■□□□□ 0.2
BEST1-208ENST00000534553 NGLY1Q96IV0 654 aa16.3■□□□□ 0.2
BEST1-208ENST00000534553 GPR108Q9NPR9 543 aa16.3■□□□□ 0.2
BEST1-208ENST00000534553 ST18O60284 1047 aa16.29■□□□□ 0.2
BEST1-208ENST00000534553 EAF2Q96CJ1 260 aaPredicted RBP16.29■□□□□ 0.2
BEST1-208ENST00000534553 IL17RAQ96F46 866 aa16.29■□□□□ 0.2
BEST1-208ENST00000534553 ANTXR1Q9H6X2 564 aa16.29■□□□□ 0.2
BEST1-208ENST00000534553 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.29■□□□□ 0.2
BEST1-208ENST00000534553 CDHR2Q9BYE9 1310 aa16.29■□□□□ 0.2
BEST1-208ENST00000534553 BCL9LQ86UU0 1499 aa16.29■□□□□ 0.2
BEST1-208ENST00000534553 K7ELQ4 463 aaPredicted RBP16.29■□□□□ 0.2
BEST1-208ENST00000534553 CIAO1O76071 339 aa16.29■□□□□ 0.2
BEST1-208ENST00000534553 NBR1Q14596 966 aa16.29■□□□□ 0.2
BEST1-208ENST00000534553 TICAM2Q86XR7 235 aa16.29■□□□□ 0.2
BEST1-208ENST00000534553 ZBTB38Q8NAP3 1195 aaPredicted RBP16.29■□□□□ 0.2
BEST1-208ENST00000534553 SLC4A9Q96Q91 983 aa16.29■□□□□ 0.2
BEST1-208ENST00000534553 SIL1Q9H173 461 aa16.29■□□□□ 0.2
BEST1-208ENST00000534553 ZNF330Q9Y3S2 320 aaPredicted RBP16.29■□□□□ 0.2
BEST1-208ENST00000534553 AK9Q5TCS8 1911 aa16.28■□□□□ 0.2
BEST1-208ENST00000534553 IL15P40933 162 aaPredicted RBP16.28■□□□□ 0.2
BEST1-208ENST00000534553 ZNF831Q5JPB2 1677 aa16.27■□□□□ 0.2
BEST1-208ENST00000534553 TNNI3KQ59H18 835 aa16.27■□□□□ 0.2
BEST1-208ENST00000534553 ANO2Q9NQ90 1003 aa16.27■□□□□ 0.2
BEST1-208ENST00000534553 CIZ1Q9ULV3 898 aaPredicted RBP16.27■□□□□ 0.2
BEST1-208ENST00000534553 ZBTB1Q9Y2K1 713 aa16.27■□□□□ 0.2
BEST1-208ENST00000534553 FPGT-TNNI3KV9GXZ4 949 aa16.27■□□□□ 0.2
BEST1-208ENST00000534553 RFX7Q2KHR2 1363 aa16.27■□□□□ 0.19
BEST1-208ENST00000534553 SGSM2O43147 1006 aa16.26■□□□□ 0.19
BEST1-208ENST00000534553 C8orf37Q96NL8 207 aa16.26■□□□□ 0.19
BEST1-208ENST00000534553 SLKQ9H2G2 1235 aaPredicted RBP16.26■□□□□ 0.19
BEST1-208ENST00000534553 DIAPH3Q9NSV4 1193 aa16.26■□□□□ 0.19
BEST1-208ENST00000534553 CHMP5Q9NZZ3 219 aa16.26■□□□□ 0.19
BEST1-208ENST00000534553 RAD50Q92878 1312 aa16.26■□□□□ 0.19
BEST1-208ENST00000534553 LOC102724428A0A0B4J2F2 783 aa16.26■□□□□ 0.19
BEST1-208ENST00000534553 MCM2P49736 904 aa16.26■□□□□ 0.19
BEST1-208ENST00000534553 SIK1P57059 783 aa16.26■□□□□ 0.19
BEST1-208ENST00000534553 KLHDC4Q8TBB5 520 aa16.26■□□□□ 0.19
BEST1-208ENST00000534553 CCDC87Q9NVE4 849 aa16.26■□□□□ 0.19
BEST1-208ENST00000534553 CHMP3Q9Y3E7 222 aa16.26■□□□□ 0.19
BEST1-208ENST00000534553 RREB1Q92766 1687 aa16.26■□□□□ 0.19
BEST1-208ENST00000534553 ANKRD36CQ5JPF3 1778 aa16.25■□□□□ 0.19
BEST1-208ENST00000534553 PALLDQ8WX93 1383 aa16.25■□□□□ 0.19
BEST1-208ENST00000534553 NFKBIBQ15653 356 aa16.25■□□□□ 0.19
BEST1-208ENST00000534553 CCDC57Q2TAC2 916 aa16.25■□□□□ 0.19
BEST1-208ENST00000534553 KIAA1211Q6ZU35 1233 aa16.25■□□□□ 0.19
BEST1-208ENST00000534553 DZIP3Q86Y13 1208 aaKnown RBP16.25■□□□□ 0.19
BEST1-208ENST00000534553 AK7Q96M32 723 aa16.25■□□□□ 0.19
BEST1-208ENST00000534553 EYA2O00167 538 aa16.24■□□□□ 0.19
BEST1-208ENST00000534553 ATP5JP18859 108 aa16.24■□□□□ 0.19
BEST1-208ENST00000534553 ATP6V1AP38606 617 aa16.24■□□□□ 0.19
BEST1-208ENST00000534553 EIF5P55010 431 aaKnown RBP16.24■□□□□ 0.19
BEST1-208ENST00000534553 NLRP10Q86W26 655 aa16.24■□□□□ 0.19
BEST1-208ENST00000534553 JARID2Q92833 1246 aaPredicted RBP16.24■□□□□ 0.19
BEST1-208ENST00000534553 CCDC8Q9H0W5 538 aaPredicted RBP16.24■□□□□ 0.19
BEST1-208ENST00000534553 RGL2O15211 777 aa16.24■□□□□ 0.19
BEST1-208ENST00000534553 CSF1RP07333 972 aa16.24■□□□□ 0.19
BEST1-208ENST00000534553 HSP90AA1P07900 732 aaKnown RBP16.24■□□□□ 0.19
BEST1-208ENST00000534553 HSP90B1P14625 803 aaKnown RBP16.24■□□□□ 0.19
BEST1-208ENST00000534553 TFCP2Q12800 502 aa16.24■□□□□ 0.19
BEST1-208ENST00000534553 FAM98CQ17RN3 349 aaKnown RBP16.24■□□□□ 0.19
BEST1-208ENST00000534553 ACSBG1Q96GR2 724 aa16.22■□□□□ 0.19
BEST1-208ENST00000534553 ARXQ96QS3 562 aa16.22■□□□□ 0.19
BEST1-208ENST00000534553 USP21Q9UK80 565 aa16.22■□□□□ 0.19
BEST1-208ENST00000534553 MAP4K4O95819 1239 aaPredicted RBP16.22■□□□□ 0.19
BEST1-208ENST00000534553 HSPA4P34932 840 aa16.22■□□□□ 0.19
BEST1-208ENST00000534553 CRKLP46109 303 aaKnown RBP16.22■□□□□ 0.19
BEST1-208ENST00000534553 INTS5Q6P9B9 1019 aaKnown RBP16.22■□□□□ 0.19
BEST1-208ENST00000534553 ATG9AQ7Z3C6 839 aa16.22■□□□□ 0.19
BEST1-208ENST00000534553 SNRKQ9NRH2 765 aa16.22■□□□□ 0.19
BEST1-208ENST00000534553 DBNLQ9UJU6 430 aaKnown RBP16.22■□□□□ 0.19
BEST1-208ENST00000534553 AKAP2Q9Y2D5 859 aa16.22■□□□□ 0.19
BEST1-208ENST00000534553 IFIT5Q13325 482 aaKnown RBP16.21■□□□□ 0.19
BEST1-208ENST00000534553 HLFQ16534 295 aa16.21■□□□□ 0.19
BEST1-208ENST00000534553 PARP10Q53GL7 1025 aa16.21■□□□□ 0.19
BEST1-208ENST00000534553 TLR7Q9NYK1 1049 aaKnown RBP16.21■□□□□ 0.19
BEST1-208ENST00000534553 KAT6BQ8WYB5 2073 aa16.21■□□□□ 0.18
BEST1-208ENST00000534553 THSD7AQ9UPZ6 1657 aa16.2■□□□□ 0.18
BEST1-208ENST00000534553 A0A0G2JS52 829 aa16.2■□□□□ 0.18
BEST1-208ENST00000534553 DDIT3P35638 169 aa16.2■□□□□ 0.18
BEST1-208ENST00000534553 ZNF34Q8IZ26 560 aa16.2■□□□□ 0.18
BEST1-208ENST00000534553 FAM89AQ96GI7 184 aa16.2■□□□□ 0.18
BEST1-208ENST00000534553 PDE8AO60658 829 aa16.19■□□□□ 0.18
BEST1-208ENST00000534553 CWC27Q6UX04 472 aaKnown RBP16.19■□□□□ 0.18
BEST1-208ENST00000534553 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.19■□□□□ 0.18
BEST1-208ENST00000534553 BOLA2Q9H3K6 86 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms