RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 ATP6V1AP38606 617 aa9.26□□□□□ -0.93
ERCC3-204ENST00000456257 PTPN12Q05209 780 aaKnown RBP9.26□□□□□ -0.93
ERCC3-204ENST00000456257 MEX3CQ5U5Q3 659 aaKnown RBP9.26□□□□□ -0.93
ERCC3-204ENST00000456257 UBE3BQ7Z3V4 1068 aa9.26□□□□□ -0.93
ERCC3-204ENST00000456257 NLRP10Q86W26 655 aa9.26□□□□□ -0.93
ERCC3-204ENST00000456257 SYTL4Q96C24 671 aaPredicted RBP9.26□□□□□ -0.93
ERCC3-204ENST00000456257 TJP1Q07157 1748 aa9.25□□□□□ -0.93
ERCC3-204ENST00000456257 SMARCA5O60264 1052 aaPredicted RBP9.25□□□□□ -0.93
ERCC3-204ENST00000456257 RPS6KA4O75676 772 aa9.25□□□□□ -0.93
ERCC3-204ENST00000456257 HMGB2P26583 209 aaKnown RBP9.25□□□□□ -0.93
ERCC3-204ENST00000456257 HLFQ16534 295 aa9.25□□□□□ -0.93
ERCC3-204ENST00000456257 KIF6Q6ZMV9 814 aa9.25□□□□□ -0.93
ERCC3-204ENST00000456257 FAM196AQ6ZSG2 479 aa9.25□□□□□ -0.93
ERCC3-204ENST00000456257 PTF1AQ7RTS3 328 aa9.25□□□□□ -0.93
ERCC3-204ENST00000456257 DZIP3Q86Y13 1208 aaKnown RBP9.25□□□□□ -0.93
ERCC3-204ENST00000456257 OTUD7AQ8TE49 926 aaPredicted RBP9.25□□□□□ -0.93
ERCC3-204ENST00000456257 ZBTB3Q9H5J0 574 aa9.25□□□□□ -0.93
ERCC3-204ENST00000456257 GPR108Q9NPR9 543 aa9.25□□□□□ -0.93
ERCC3-204ENST00000456257 NUP188Q5SRE5 1749 aa9.25□□□□□ -0.93
ERCC3-204ENST00000456257 DOT1LQ8TEK3 1739 aa9.25□□□□□ -0.93
ERCC3-204ENST00000456257 CIAO1O76071 339 aa9.24□□□□□ -0.93
ERCC3-204ENST00000456257 RBM6P78332 1123 aaKnown RBP9.24□□□□□ -0.93
ERCC3-204ENST00000456257 ZNF772Q68DY9 489 aaPredicted RBP9.24□□□□□ -0.93
ERCC3-204ENST00000456257 LMBR1LQ6UX01 489 aa9.24□□□□□ -0.93
ERCC3-204ENST00000456257 TICAM2Q86XR7 235 aa9.24□□□□□ -0.93
ERCC3-204ENST00000456257 TBC1D32Q96NH3 1257 aa9.24□□□□□ -0.93
ERCC3-204ENST00000456257 ZBTB47Q9UFB7 747 aaPredicted RBP9.24□□□□□ -0.93
ERCC3-204ENST00000456257 ARFGEF2Q9Y6D5 1785 aa9.24□□□□□ -0.93
ERCC3-204ENST00000456257 KAT6BQ8WYB5 2073 aa9.24□□□□□ -0.93
ERCC3-204ENST00000456257 EPB41L2O43491 1005 aaKnown RBP9.23□□□□□ -0.93
ERCC3-204ENST00000456257 SDSP20132 328 aa9.23□□□□□ -0.93
ERCC3-204ENST00000456257 MX1P20591 662 aa9.23□□□□□ -0.93
ERCC3-204ENST00000456257 G3BP1Q13283 466 aaKnown RBP eCLIP9.23□□□□□ -0.93
ERCC3-204ENST00000456257 PARP10Q53GL7 1025 aa9.23□□□□□ -0.93
ERCC3-204ENST00000456257 SLC10A5Q5PT55 438 aa9.23□□□□□ -0.93
ERCC3-204ENST00000456257 LINC00116Q8NCU8 138 aa9.23□□□□□ -0.93
ERCC3-204ENST00000456257 PI4K2BQ8TCG2 481 aa9.23□□□□□ -0.93
ERCC3-204ENST00000456257 TTC41PQ6P2S7 1318 aa9.23□□□□□ -0.93
ERCC3-204ENST00000456257 RBM25P49756 843 aaKnown RBP9.22□□□□□ -0.93
ERCC3-204ENST00000456257 TBC1D9Q6ZT07 1266 aa9.22□□□□□ -0.93
ERCC3-204ENST00000456257 ATG9AQ7Z3C6 839 aa9.22□□□□□ -0.93
ERCC3-204ENST00000456257 CLASRPQ8N2M8 674 aaKnown RBP9.22□□□□□ -0.93
ERCC3-204ENST00000456257 TTLL11Q8NHH1 800 aa9.22□□□□□ -0.93
ERCC3-204ENST00000456257 IL17RAQ96F46 866 aa9.22□□□□□ -0.93
ERCC3-204ENST00000456257 IPO9Q96P70 1041 aaKnown RBP9.22□□□□□ -0.93
ERCC3-204ENST00000456257 PA2G4Q9UQ80 394 aaKnown RBP9.22□□□□□ -0.93
ERCC3-204ENST00000456257 MYH14Q7Z406 1995 aaKnown RBP9.21□□□□□ -0.93
ERCC3-204ENST00000456257 NHSQ6T4R5 1651 aa9.21□□□□□ -0.93
ERCC3-204ENST00000456257 PDE8AO60658 829 aa9.21□□□□□ -0.94
ERCC3-204ENST00000456257 CDC45O75419 566 aa9.21□□□□□ -0.94
ERCC3-204ENST00000456257 HSP90B1P14625 803 aaKnown RBP9.21□□□□□ -0.94
ERCC3-204ENST00000456257 SLC27A3Q5K4L6 730 aa9.21□□□□□ -0.94
ERCC3-204ENST00000456257 KRT27Q7Z3Y8 459 aa9.21□□□□□ -0.94
ERCC3-204ENST00000456257 EAF2Q96CJ1 260 aaPredicted RBP9.21□□□□□ -0.94
ERCC3-204ENST00000456257 NARFQ9UHQ1 456 aa9.21□□□□□ -0.94
ERCC3-204ENST00000456257 TBC1D2BQ9UPU7 963 aa9.21□□□□□ -0.94
ERCC3-204ENST00000456257 UBN2Q6ZU65 1347 aa9.21□□□□□ -0.94
ERCC3-204ENST00000456257 RTL9Q8NET4 1388 aa9.21□□□□□ -0.94
ERCC3-204ENST00000456257 EYA2O00167 538 aa9.2□□□□□ -0.94
ERCC3-204ENST00000456257 PLSCR1O15162 318 aa9.2□□□□□ -0.94
ERCC3-204ENST00000456257 GLRX3O76003 335 aaKnown RBP9.2□□□□□ -0.94
ERCC3-204ENST00000456257 IL15P40933 162 aaPredicted RBP9.2□□□□□ -0.94
ERCC3-204ENST00000456257 SUSD4Q5VX71 490 aa9.2□□□□□ -0.94
ERCC3-204ENST00000456257 JARID2Q92833 1246 aaPredicted RBP9.2□□□□□ -0.94
ERCC3-204ENST00000456257 FAM89AQ96GI7 184 aa9.2□□□□□ -0.94
ERCC3-204ENST00000456257 BCL2L12Q9HB09 334 aa9.2□□□□□ -0.94
ERCC3-204ENST00000456257 IL1RAPL2Q9NP60 686 aa9.2□□□□□ -0.94
ERCC3-204ENST00000456257 RIPOR2Q9Y4F9 1068 aa9.2□□□□□ -0.94
ERCC3-204ENST00000456257 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.2□□□□□ -0.94
ERCC3-204ENST00000456257 IRS4O14654 1257 aaPredicted RBP9.19□□□□□ -0.94
ERCC3-204ENST00000456257 NTSR2O95665 410 aa9.19□□□□□ -0.94
ERCC3-204ENST00000456257 ANP32AP39687 249 aaKnown RBP9.19□□□□□ -0.94
ERCC3-204ENST00000456257 NPM2Q86SE8 214 aaKnown RBP9.19□□□□□ -0.94
ERCC3-204ENST00000456257 SYNE4Q8N205 404 aa9.19□□□□□ -0.94
ERCC3-204ENST00000456257 PROM2Q8N271 834 aa9.19□□□□□ -0.94
ERCC3-204ENST00000456257 IL27Q8NEV9 243 aa9.19□□□□□ -0.94
ERCC3-204ENST00000456257 SNRKQ9NRH2 765 aa9.19□□□□□ -0.94
ERCC3-204ENST00000456257 LRRC4BQ9NT99 713 aa9.19□□□□□ -0.94
ERCC3-204ENST00000456257 ECHDC1Q9NTX5 307 aa9.19□□□□□ -0.94
ERCC3-204ENST00000456257 COL5A3P25940 1745 aaPredicted RBP9.19□□□□□ -0.94
ERCC3-204ENST00000456257 APBB1O00213 710 aa9.18□□□□□ -0.94
ERCC3-204ENST00000456257 ERC2O15083 957 aa9.18□□□□□ -0.94
ERCC3-204ENST00000456257 ZBTB22O15209 634 aa9.18□□□□□ -0.94
ERCC3-204ENST00000456257 ATP5JP18859 108 aa9.18□□□□□ -0.94
ERCC3-204ENST00000456257 CHMLP26374 656 aa9.18□□□□□ -0.94
ERCC3-204ENST00000456257 CTSWP56202 376 aa9.18□□□□□ -0.94
ERCC3-204ENST00000456257 SF3B3Q15393 1217 aaKnown RBP9.18□□□□□ -0.94
ERCC3-204ENST00000456257 TNNI3KQ59H18 835 aa9.18□□□□□ -0.94
ERCC3-204ENST00000456257 SBF2Q86WG5 1849 aa9.18□□□□□ -0.94
ERCC3-204ENST00000456257 NUTM1Q86Y26 1132 aa9.18□□□□□ -0.94
ERCC3-204ENST00000456257 KIF2CQ99661 725 aa9.18□□□□□ -0.94
ERCC3-204ENST00000456257 UTP14AQ9BVJ6 771 aaKnown RBP9.18□□□□□ -0.94
ERCC3-204ENST00000456257 USP26Q9BXU7 913 aa9.18□□□□□ -0.94
ERCC3-204ENST00000456257 UPF2Q9HAU5 1272 aaKnown RBP9.18□□□□□ -0.94
ERCC3-204ENST00000456257 RGS17Q9UGC6 210 aaPredicted RBP9.18□□□□□ -0.94
ERCC3-204ENST00000456257 TRMT112Q9UI30 125 aaKnown RBP9.18□□□□□ -0.94
ERCC3-204ENST00000456257 CCNL1Q9UK58 526 aaPredicted RBP9.18□□□□□ -0.94
ERCC3-204ENST00000456257 ZNF652Q9Y2D9 606 aa9.18□□□□□ -0.94
ERCC3-204ENST00000456257 FPGT-TNNI3KV9GXZ4 949 aa9.18□□□□□ -0.94
ERCC3-204ENST00000456257 LY75O60449 1722 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms