RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 NEURL1BA8MQ27 555 aa18.41■□□□□ 0.54
BRAT1-201ENST00000340611 OFD1O75665 1012 aa18.41■□□□□ 0.54
BRAT1-201ENST00000340611 STARD3NLO95772 234 aa18.41■□□□□ 0.54
BRAT1-201ENST00000340611 LINS1Q8NG48 757 aa18.41■□□□□ 0.54
BRAT1-201ENST00000340611 PXDNLA1KZ92 1463 aa18.41■□□□□ 0.54
BRAT1-201ENST00000340611 OTUD7AQ8TE49 926 aaPredicted RBP18.4■□□□□ 0.54
BRAT1-201ENST00000340611 NEXNQ0ZGT2 675 aa18.4■□□□□ 0.54
BRAT1-201ENST00000340611 PPP1R42Q7Z4L9 355 aa18.4■□□□□ 0.54
BRAT1-201ENST00000340611 RPAP2Q8IXW5 612 aaPredicted RBP18.4■□□□□ 0.54
BRAT1-201ENST00000340611 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
BRAT1-201ENST00000340611 ARFGEF2Q9Y6D5 1785 aa18.4■□□□□ 0.54
BRAT1-201ENST00000340611 THSD7AQ9UPZ6 1657 aa18.4■□□□□ 0.54
BRAT1-201ENST00000340611 NUCB1Q02818 461 aa18.39■□□□□ 0.54
BRAT1-201ENST00000340611 CHD1LQ86WJ1 897 aa18.39■□□□□ 0.54
BRAT1-201ENST00000340611 HSCBQ8IWL3 235 aa18.39■□□□□ 0.54
BRAT1-201ENST00000340611 HLFQ16534 295 aa18.39■□□□□ 0.53
BRAT1-201ENST00000340611 PLBD2Q8NHP8 589 aa18.39■□□□□ 0.53
BRAT1-201ENST00000340611 KAZALD1Q96I82 304 aa18.39■□□□□ 0.53
BRAT1-201ENST00000340611 N4BP2Q86UW6 1770 aaPredicted RBP18.39■□□□□ 0.53
BRAT1-201ENST00000340611 GRM8O00222 908 aa18.39■□□□□ 0.53
BRAT1-201ENST00000340611 DMTNQ08495 405 aa18.39■□□□□ 0.53
BRAT1-201ENST00000340611 UBE3BQ7Z3V4 1068 aa18.39■□□□□ 0.53
BRAT1-201ENST00000340611 SRGAP3O43295 1099 aa18.38■□□□□ 0.53
BRAT1-201ENST00000340611 GPTP24298 496 aa18.38■□□□□ 0.53
BRAT1-201ENST00000340611 GCKRQ14397 625 aa18.38■□□□□ 0.53
BRAT1-201ENST00000340611 EPHA10Q5JZY3 1008 aa18.38■□□□□ 0.53
BRAT1-201ENST00000340611 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.38■□□□□ 0.53
BRAT1-201ENST00000340611 ZNF830Q96NB3 372 aaPredicted RBP18.38■□□□□ 0.53
BRAT1-201ENST00000340611 DCTPP1Q9H773 170 aa18.38■□□□□ 0.53
BRAT1-201ENST00000340611 MYH14Q7Z406 1995 aaKnown RBP18.38■□□□□ 0.53
BRAT1-201ENST00000340611 AFDNP55196 1824 aaKnown RBP18.38■□□□□ 0.53
BRAT1-201ENST00000340611 CRKLP46109 303 aaKnown RBP18.38■□□□□ 0.53
BRAT1-201ENST00000340611 TJP1Q07157 1748 aa18.38■□□□□ 0.53
BRAT1-201ENST00000340611 IPO4Q8TEX9 1081 aaKnown RBP18.37■□□□□ 0.53
BRAT1-201ENST00000340611 ATP8B2P98198 1209 aa18.37■□□□□ 0.53
BRAT1-201ENST00000340611 KLHDC4Q8TBB5 520 aa18.37■□□□□ 0.53
BRAT1-201ENST00000340611 BICC1Q9H694 974 aaKnown RBP18.37■□□□□ 0.53
BRAT1-201ENST00000340611 PA2G4Q9UQ80 394 aaKnown RBP18.37■□□□□ 0.53
BRAT1-201ENST00000340611 A0A087WZG4 1122 aa18.36■□□□□ 0.53
BRAT1-201ENST00000340611 ZBTB22O15209 634 aa18.36■□□□□ 0.53
BRAT1-201ENST00000340611 ALDH1L1O75891 902 aa18.36■□□□□ 0.53
BRAT1-201ENST00000340611 SYNE4Q8N205 404 aa18.36■□□□□ 0.53
BRAT1-201ENST00000340611 INTS5Q6P9B9 1019 aaKnown RBP18.36■□□□□ 0.53
BRAT1-201ENST00000340611 TMEM51Q9NW97 253 aa18.36■□□□□ 0.53
BRAT1-201ENST00000340611 ZSCAN30Q86W11 494 aa18.36■□□□□ 0.53
BRAT1-201ENST00000340611 GCC1Q96CN9 775 aa18.36■□□□□ 0.53
BRAT1-201ENST00000340611 TEX13AQ9BXU3 409 aaPredicted RBP18.36■□□□□ 0.53
BRAT1-201ENST00000340611 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
BRAT1-201ENST00000340611 BRWD3Q6RI45 1802 aa18.35■□□□□ 0.53
BRAT1-201ENST00000340611 TSHZ3Q63HK5 1081 aa18.35■□□□□ 0.53
BRAT1-201ENST00000340611 FAM177BA6PVY3 158 aa18.35■□□□□ 0.53
BRAT1-201ENST00000340611 ZSCAN20P17040 1043 aaPredicted RBP18.35■□□□□ 0.53
BRAT1-201ENST00000340611 LINC00116Q8NCU8 138 aa18.35■□□□□ 0.53
BRAT1-201ENST00000340611 DDX11L8A8MPP1 907 aa18.34■□□□□ 0.53
BRAT1-201ENST00000340611 ONECUT3O60422 494 aaPredicted RBP18.34■□□□□ 0.53
BRAT1-201ENST00000340611 CBX1P83916 185 aa18.34■□□□□ 0.53
BRAT1-201ENST00000340611 IL1RAPL2Q9NP60 686 aa18.34■□□□□ 0.53
BRAT1-201ENST00000340611 BTAF1O14981 1849 aa18.34■□□□□ 0.53
BRAT1-201ENST00000340611 CCDC85AQ96PX6 553 aaPredicted RBP18.33■□□□□ 0.53
BRAT1-201ENST00000340611 HMMRO75330 724 aa18.33■□□□□ 0.52
BRAT1-201ENST00000340611 SURF6O75683 361 aaKnown RBP18.33■□□□□ 0.52
BRAT1-201ENST00000340611 TRIM37O94972 964 aa18.33■□□□□ 0.52
BRAT1-201ENST00000340611 NCLP19338 710 aaKnown RBP18.33■□□□□ 0.52
BRAT1-201ENST00000340611 IGSF3O75054 1194 aa18.33■□□□□ 0.52
BRAT1-201ENST00000340611 KIF6Q6ZMV9 814 aa18.33■□□□□ 0.52
BRAT1-201ENST00000340611 SIL1Q9H173 461 aa18.33■□□□□ 0.52
BRAT1-201ENST00000340611 CCDC87Q9NVE4 849 aa18.33■□□□□ 0.52
BRAT1-201ENST00000340611 NUP188Q5SRE5 1749 aa18.32■□□□□ 0.52
BRAT1-201ENST00000340611 AMIGO3Q86WK7 504 aa18.32■□□□□ 0.52
BRAT1-201ENST00000340611 DZIP3Q86Y13 1208 aaKnown RBP18.32■□□□□ 0.52
BRAT1-201ENST00000340611 TNPO1Q92973 898 aaKnown RBP18.32■□□□□ 0.52
BRAT1-201ENST00000340611 KRT27Q7Z3Y8 459 aa18.31■□□□□ 0.52
BRAT1-201ENST00000340611 FAM89AQ96GI7 184 aa18.31■□□□□ 0.52
BRAT1-201ENST00000340611 GOLGB1Q14789 3259 aaKnown RBP18.31■□□□□ 0.52
BRAT1-201ENST00000340611 SSH3Q8TE77 659 aa18.3■□□□□ 0.52
BRAT1-201ENST00000340611 CHMP3Q9Y3E7 222 aa18.3■□□□□ 0.52
BRAT1-201ENST00000340611 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.3■□□□□ 0.52
BRAT1-201ENST00000340611 SBF2Q86WG5 1849 aa18.3■□□□□ 0.52
BRAT1-201ENST00000340611 MAP3K15Q6ZN16 1313 aa18.3■□□□□ 0.52
BRAT1-201ENST00000340611 SMARCC1Q92922 1105 aaPredicted RBP18.29■□□□□ 0.52
BRAT1-201ENST00000340611 CWC25Q9NXE8 425 aaPredicted RBP18.29■□□□□ 0.52
BRAT1-201ENST00000340611 RGS17Q9UGC6 210 aaPredicted RBP18.29■□□□□ 0.52
BRAT1-201ENST00000340611 TCIRG1Q13488 830 aa18.29■□□□□ 0.52
BRAT1-201ENST00000340611 UTP14CQ5TAP6 766 aaKnown RBP18.29■□□□□ 0.52
BRAT1-201ENST00000340611 CCNL1Q9UK58 526 aaPredicted RBP18.29■□□□□ 0.52
BRAT1-201ENST00000340611 EIF5P55010 431 aaKnown RBP18.29■□□□□ 0.52
BRAT1-201ENST00000340611 IL6STP40189 918 aaPredicted RBP18.28■□□□□ 0.52
BRAT1-201ENST00000340611 POLA2Q14181 598 aa18.28■□□□□ 0.52
BRAT1-201ENST00000340611 TSC1Q92574 1164 aa18.28■□□□□ 0.52
BRAT1-201ENST00000340611 NASPP49321 788 aaPredicted RBP18.27■□□□□ 0.52
BRAT1-201ENST00000340611 CASP7P55210 303 aa18.27■□□□□ 0.52
BRAT1-201ENST00000340611 UTYO14607 1347 aa18.27■□□□□ 0.52
BRAT1-201ENST00000340611 DDIT3P35638 169 aa18.27■□□□□ 0.52
BRAT1-201ENST00000340611 OS9Q13438 667 aaPredicted RBP18.27■□□□□ 0.52
BRAT1-201ENST00000340611 POTEAQ6S8J7 498 aa18.27■□□□□ 0.52
BRAT1-201ENST00000340611 GIGYF2Q6Y7W6 1299 aaKnown RBP18.27■□□□□ 0.52
BRAT1-201ENST00000340611 NUTM1Q86Y26 1132 aa18.27■□□□□ 0.52
BRAT1-201ENST00000340611 PLEKHM2Q8IWE5 1019 aa18.27■□□□□ 0.52
BRAT1-201ENST00000340611 LRRC4BQ9NT99 713 aa18.27■□□□□ 0.52
BRAT1-201ENST00000340611 RBM6P78332 1123 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms