RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 RBM42Q9BTD8 480 aaKnown RBP8.9□□□□□ -0.99
NUP43-201ENST00000340413 TTC41PQ6P2S7 1318 aa8.9□□□□□ -0.99
NUP43-201ENST00000340413 CAMTA2O94983 1202 aa8.89□□□□□ -0.99
NUP43-201ENST00000340413 CSF1RP07333 972 aa8.89□□□□□ -0.99
NUP43-201ENST00000340413 NARFQ9UHQ1 456 aa8.89□□□□□ -0.99
NUP43-201ENST00000340413 LRRFIP2Q9Y608 721 aaKnown RBP8.89□□□□□ -0.99
NUP43-201ENST00000340413 LRRC37AA6NMS7 1700 aa8.89□□□□□ -0.99
NUP43-201ENST00000340413 A1BGP04217 495 aa8.89□□□□□ -0.99
NUP43-201ENST00000340413 ITPK1Q13572 414 aa8.89□□□□□ -0.99
NUP43-201ENST00000340413 FAM161AQ3B820 660 aa8.89□□□□□ -0.99
NUP43-201ENST00000340413 ZBTB47Q9UFB7 747 aaPredicted RBP8.89□□□□□ -0.99
NUP43-201ENST00000340413 SLC10A5Q5PT55 438 aa8.89□□□□□ -0.99
NUP43-201ENST00000340413 NPM2Q86SE8 214 aaKnown RBP8.89□□□□□ -0.99
NUP43-201ENST00000340413 NYXQ9GZU5 481 aa8.89□□□□□ -0.99
NUP43-201ENST00000340413 PTCD1O75127 700 aaKnown RBP8.88□□□□□ -0.99
NUP43-201ENST00000340413 MYL6BP14649 208 aa8.88□□□□□ -0.99
NUP43-201ENST00000340413 PPP1R42Q7Z4L9 355 aa8.88□□□□□ -0.99
NUP43-201ENST00000340413 DZIP3Q86Y13 1208 aaKnown RBP8.88□□□□□ -0.99
NUP43-201ENST00000340413 CCDC125Q86Z20 511 aa8.88□□□□□ -0.99
NUP43-201ENST00000340413 LRRCC1Q9C099 1032 aa8.88□□□□□ -0.99
NUP43-201ENST00000340413 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.88□□□□□ -0.99
NUP43-201ENST00000340413 ZBTB1Q9Y2K1 713 aa8.88□□□□□ -0.99
NUP43-201ENST00000340413 NLRP10Q86W26 655 aa8.87□□□□□ -0.99
NUP43-201ENST00000340413 LINC00116Q8NCU8 138 aa8.87□□□□□ -0.99
NUP43-201ENST00000340413 RFX5P48382 616 aaPredicted RBP8.87□□□□□ -0.99
NUP43-201ENST00000340413 TMED8Q6PL24 325 aaPredicted RBP8.87□□□□□ -0.99
NUP43-201ENST00000340413 TTLL7Q6ZT98 887 aa8.87□□□□□ -0.99
NUP43-201ENST00000340413 NECTIN2Q92692 538 aa8.87□□□□□ -0.99
NUP43-201ENST00000340413 SUCLG2Q96I99 432 aa8.87□□□□□ -0.99
NUP43-201ENST00000340413 FOXO4P98177 505 aa8.87□□□□□ -0.99
NUP43-201ENST00000340413 CCNL1Q9UK58 526 aaPredicted RBP8.87□□□□□ -0.99
NUP43-201ENST00000340413 AK9Q5TCS8 1911 aa8.87□□□□□ -0.99
NUP43-201ENST00000340413 NBPF7P0C2Y1 421 aaPredicted RBP8.86□□□□□ -0.99
NUP43-201ENST00000340413 KAZALD1Q96I82 304 aa8.86□□□□□ -0.99
NUP43-201ENST00000340413 BACH2Q9BYV9 841 aa8.86□□□□□ -0.99
NUP43-201ENST00000340413 PDE8AO60658 829 aa8.86□□□□□ -0.99
NUP43-201ENST00000340413 KIAA1551Q9HCM1 1747 aa8.86□□□□□ -0.99
NUP43-201ENST00000340413 GPATCH3Q96I76 525 aa8.86□□□□□ -0.99
NUP43-201ENST00000340413 SYTL4Q96C24 671 aaPredicted RBP8.85□□□□□ -0.99
NUP43-201ENST00000340413 ACSBG1Q96GR2 724 aa8.85□□□□□ -0.99
NUP43-201ENST00000340413 RTCBQ9Y3I0 505 aaKnown RBP8.85□□□□□ -0.99
NUP43-201ENST00000340413 KAT6BQ8WYB5 2073 aa8.85□□□□□ -0.99
NUP43-201ENST00000340413 AIMP1Q12904 312 aaKnown RBP8.85□□□□□ -0.99
NUP43-201ENST00000340413 CARMIL3Q8ND23 1372 aa8.85□□□□□ -0.99
NUP43-201ENST00000340413 SRGAP3O43295 1099 aa8.85□□□□□ -0.99
NUP43-201ENST00000340413 PDE4AP27815 886 aa8.85□□□□□ -0.99
NUP43-201ENST00000340413 IL15P40933 162 aaPredicted RBP8.85□□□□□ -0.99
NUP43-201ENST00000340413 ZNF512BQ96KM6 892 aaPredicted RBP8.85□□□□□ -0.99
NUP43-201ENST00000340413 UTP14AQ9BVJ6 771 aaKnown RBP8.85□□□□□ -0.99
NUP43-201ENST00000340413 DLEC1Q9Y238 1755 aa8.85□□□□□ -0.99
NUP43-201ENST00000340413 KCNQ2O43526 872 aa8.84□□□□□ -0.99
NUP43-201ENST00000340413 ANXA1P04083 346 aa8.84□□□□□ -0.99
NUP43-201ENST00000340413 CWF19L2Q2TBE0 894 aaKnown RBP8.84□□□□□ -0.99
NUP43-201ENST00000340413 BICC1Q9H694 974 aaKnown RBP8.84□□□□□ -0.99
NUP43-201ENST00000340413 SH3TC1Q8TE82 1336 aa8.84□□□□□ -0.99
NUP43-201ENST00000340413 SF3B3Q15393 1217 aaKnown RBP8.84□□□□□ -0.99
NUP43-201ENST00000340413 TTC22Q5TAA0 569 aa8.84□□□□□ -0.99
NUP43-201ENST00000340413 ZNF609O15014 1411 aa8.84□□□□□ -0.99
NUP43-201ENST00000340413 PNMA6EA0A0J9YXQ4 647 aa8.84□□□□□ -0.99
NUP43-201ENST00000340413 NTSR2O95665 410 aa8.84□□□□□ -0.99
NUP43-201ENST00000340413 ANKRD45Q5TZF3 282 aa8.84□□□□□ -0.99
NUP43-201ENST00000340413 PLEKHM2Q8IWE5 1019 aa8.84□□□□□ -0.99
NUP43-201ENST00000340413 RHPN1Q8TCX5 695 aa8.84□□□□□ -0.99
NUP43-201ENST00000340413 RTN4Q9NQC3 1192 aaKnown RBP8.84□□□□□ -0.99
NUP43-201ENST00000340413 KIF13BQ9NQT8 1826 aa8.84□□□□□ -0.99
NUP43-201ENST00000340413 ERC2O15083 957 aa8.83□□□□□ -1
NUP43-201ENST00000340413 G3BP1Q13283 466 aaKnown RBP eCLIP8.83□□□□□ -14e-6■□□□□ 9.2
NUP43-201ENST00000340413 IL17RAQ96F46 866 aa8.83□□□□□ -1
NUP43-201ENST00000340413 TMC4Q7Z404 712 aa8.83□□□□□ -1
NUP43-201ENST00000340413 AKT1S1Q96B36 256 aa8.83□□□□□ -1
NUP43-201ENST00000340413 AKAP2Q9Y2D5 859 aa8.83□□□□□ -1
NUP43-201ENST00000340413 CTSWP56202 376 aa8.83□□□□□ -1
NUP43-201ENST00000340413 RGS17Q9UGC6 210 aaPredicted RBP8.83□□□□□ -1
NUP43-201ENST00000340413 MAST2Q6P0Q8 1798 aa8.83□□□□□ -1
NUP43-201ENST00000340413 HIP1O00291 1037 aa8.82□□□□□ -1
NUP43-201ENST00000340413 C8orf34Q49A92 452 aa8.82□□□□□ -1
NUP43-201ENST00000340413 C1orf115Q9H7X2 142 aa8.82□□□□□ -1
NUP43-201ENST00000340413 MROH5Q6ZUA9 1318 aa8.82□□□□□ -1
NUP43-201ENST00000340413 DOCK2Q92608 1830 aa8.82□□□□□ -1
NUP43-201ENST00000340413 PTPN12Q05209 780 aaKnown RBP8.82□□□□□ -1
NUP43-201ENST00000340413 CLASRPQ8N2M8 674 aaKnown RBP8.82□□□□□ -1
NUP43-201ENST00000340413 A0A0G2JS52 829 aa8.82□□□□□ -1
NUP43-201ENST00000340413 MYT1Q01538 1121 aa8.82□□□□□ -1
NUP43-201ENST00000340413 TRAPPC3LQ5T215 181 aa8.82□□□□□ -1
NUP43-201ENST00000340413 CASC1Q6TDU7 716 aa8.82□□□□□ -1
NUP43-201ENST00000340413 UBE3BQ7Z3V4 1068 aa8.82□□□□□ -1
NUP43-201ENST00000340413 CDC5LQ99459 802 aaKnown RBP8.82□□□□□ -1
NUP43-201ENST00000340413 ZBTB3Q9H5J0 574 aa8.82□□□□□ -1
NUP43-201ENST00000340413 PDS5AQ29RF7 1337 aaKnown RBP8.82□□□□□ -1
NUP43-201ENST00000340413 UBN2Q6ZU65 1347 aa8.82□□□□□ -1
NUP43-201ENST00000340413 EYA2O00167 538 aa8.81□□□□□ -1
NUP43-201ENST00000340413 CDC45O75419 566 aa8.81□□□□□ -1
NUP43-201ENST00000340413 GLRX3O76003 335 aaKnown RBP8.81□□□□□ -1
NUP43-201ENST00000340413 SNRKQ9NRH2 765 aa8.81□□□□□ -1
NUP43-201ENST00000340413 ZPR1O75312 459 aa8.81□□□□□ -1
NUP43-201ENST00000340413 SURF6O75683 361 aaKnown RBP8.81□□□□□ -1
NUP43-201ENST00000340413 MX1P20591 662 aa8.81□□□□□ -1
NUP43-201ENST00000340413 PDE1AP54750 535 aa8.81□□□□□ -1
NUP43-201ENST00000340413 CCDC152Q4G0S7 254 aa8.81□□□□□ -1
NUP43-201ENST00000340413 RAD50Q92878 1312 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms