RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 FAM107BQ9H098 131 aa21.87■■□□□ 1.09
NPLOC4-201ENST00000331134 CHPF2Q9P2E5 772 aa21.87■■□□□ 1.09
NPLOC4-201ENST00000331134 G2E3Q7L622 706 aa21.86■■□□□ 1.09
NPLOC4-201ENST00000331134 IFIT3O14879 490 aaKnown RBP21.86■■□□□ 1.09
NPLOC4-201ENST00000331134 NPHP3Q7Z494 1330 aa21.86■■□□□ 1.09
NPLOC4-201ENST00000331134 CAVIN2O95810 425 aa21.86■■□□□ 1.09
NPLOC4-201ENST00000331134 Q6ZUG5 572 aa21.86■■□□□ 1.09
NPLOC4-201ENST00000331134 PROSER2Q86WR7 435 aaPredicted RBP21.86■■□□□ 1.09
NPLOC4-201ENST00000331134 LUC7LQ9NQ29 371 aaKnown RBP21.86■■□□□ 1.09
NPLOC4-201ENST00000331134 USP8P40818 1118 aa21.85■■□□□ 1.09
NPLOC4-201ENST00000331134 SYKP43405 635 aa21.85■■□□□ 1.09
NPLOC4-201ENST00000331134 SEPT11Q9NVA2 429 aaKnown RBP21.85■■□□□ 1.09
NPLOC4-201ENST00000331134 CCDC102BQ68D86 513 aa21.85■■□□□ 1.09
NPLOC4-201ENST00000331134 ZBTB3Q9H5J0 574 aa21.85■■□□□ 1.09
NPLOC4-201ENST00000331134 SHTN1A0MZ66 631 aa21.85■■□□□ 1.09
NPLOC4-201ENST00000331134 GOLGA8AA7E2F4 631 aa21.85■■□□□ 1.09
NPLOC4-201ENST00000331134 ZSCAN16Q9H4T2 348 aaPredicted RBP21.84■■□□□ 1.09
NPLOC4-201ENST00000331134 KLF18A0A0U1RQI7 1052 aa21.84■■□□□ 1.09
NPLOC4-201ENST00000331134 CCDC150Q8NCX0 1101 aa21.84■■□□□ 1.09
NPLOC4-201ENST00000331134 INTS4Q96HW7 963 aaKnown RBP21.84■■□□□ 1.09
NPLOC4-201ENST00000331134 UGGT2Q9NYU1 1516 aa21.84■■□□□ 1.09
NPLOC4-201ENST00000331134 NSD2O96028 1365 aa21.84■■□□□ 1.09
NPLOC4-201ENST00000331134 RNF187Q5TA31 235 aaPredicted RBP21.84■■□□□ 1.09
NPLOC4-201ENST00000331134 WASF1Q92558 559 aa21.84■■□□□ 1.09
NPLOC4-201ENST00000331134 NEFHP12036 1026 aa21.83■■□□□ 1.09
NPLOC4-201ENST00000331134 IARSP41252 1262 aaKnown RBP21.83■■□□□ 1.09
NPLOC4-201ENST00000331134 NMIQ13287 307 aaPredicted RBP21.83■■□□□ 1.09
NPLOC4-201ENST00000331134 SPA17Q15506 151 aa21.83■■□□□ 1.09
NPLOC4-201ENST00000331134 IFNKQ9P0W0 207 aa21.83■■□□□ 1.09
NPLOC4-201ENST00000331134 SLC12A7Q9Y666 1083 aa21.83■■□□□ 1.09
NPLOC4-201ENST00000331134 PIK3C2GO75747 1445 aa21.83■■□□□ 1.09
NPLOC4-201ENST00000331134 MRPS27Q92552 414 aaKnown RBP21.83■■□□□ 1.09
NPLOC4-201ENST00000331134 GTPBP4Q9BZE4 634 aaKnown RBP21.83■■□□□ 1.09
NPLOC4-201ENST00000331134 RSPH14Q9UHP6 348 aa21.83■■□□□ 1.09
NPLOC4-201ENST00000331134 IQCEQ6IPM2 695 aa21.83■■□□□ 1.09
NPLOC4-201ENST00000331134 MYO6Q9UM54 1294 aa21.83■■□□□ 1.09
NPLOC4-201ENST00000331134 ANKRD36BQ8N2N9 1353 aa21.83■■□□□ 1.08
NPLOC4-201ENST00000331134 KARSQ15046 597 aaKnown RBP21.82■■□□□ 1.08
NPLOC4-201ENST00000331134 ERLIN2O94905 339 aa21.82■■□□□ 1.08
NPLOC4-201ENST00000331134 SMAP1Q8IYB5 467 aaPredicted RBP21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 PLCD3Q8N3E9 789 aa21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 MYRIPQ8NFW9 859 aa21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 RANBP6O60518 1105 aaKnown RBP21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 CCDC113Q9H0I3 377 aa21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 BCCIPQ9P287 314 aaKnown RBP eCLIP21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 TRIM35Q9UPQ4 493 aa21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 AFMP43652 599 aa21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 MAP9Q49MG5 647 aa21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 SOGA3Q5TF21 947 aa21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 ZNF397Q8NF99 534 aaPredicted RBP21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 SRRTQ9BXP5 876 aaKnown RBP21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 CEP131Q9UPN4 1083 aa21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 IFT140Q96RY7 1462 aa21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 SLC26A6Q9BXS9 759 aa21.81■■□□□ 1.08
NPLOC4-201ENST00000331134 N4BP3O15049 544 aa21.8■■□□□ 1.08
NPLOC4-201ENST00000331134 CD2BP2O95400 341 aaKnown RBP21.8■■□□□ 1.08
NPLOC4-201ENST00000331134 CTR9Q6PD62 1173 aa21.8■■□□□ 1.08
NPLOC4-201ENST00000331134 TAF4BQ92750 862 aa21.8■■□□□ 1.08
NPLOC4-201ENST00000331134 GNL3LQ9NVN8 582 aaKnown RBP21.8■■□□□ 1.08
NPLOC4-201ENST00000331134 EIF4A2Q14240 407 aaKnown RBP21.79■■□□□ 1.08
NPLOC4-201ENST00000331134 TDRD12Q587J7 1177 aaKnown RBP21.79■■□□□ 1.08
NPLOC4-201ENST00000331134 CREB3L3Q68CJ9 461 aa21.79■■□□□ 1.08
NPLOC4-201ENST00000331134 HMG20BQ9P0W2 317 aa21.79■■□□□ 1.08
NPLOC4-201ENST00000331134 PIK3R4Q99570 1358 aa21.79■■□□□ 1.08
NPLOC4-201ENST00000331134 CTDP1Q9Y5B0 961 aaPredicted RBP21.79■■□□□ 1.08
NPLOC4-201ENST00000331134 NCKAP5LQ9HCH0 1330 aa21.79■■□□□ 1.08
NPLOC4-201ENST00000331134 JADE2Q9NQC1 790 aa21.79■■□□□ 1.08
NPLOC4-201ENST00000331134 PUF60Q9UHX1 559 aaKnown RBP21.79■■□□□ 1.08
NPLOC4-201ENST00000331134 A0A1B0GVL5 298 aa21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 USP5P45974 858 aa21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 CWF19L2Q2TBE0 894 aaKnown RBP21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 C10orf67Q8IYJ2 551 aa21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 LZTFL1Q9NQ48 299 aa21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 ACEP12821 1306 aa21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 CAPN2P17655 700 aa21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 GPTP24298 496 aa21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 HLTFQ14527 1009 aaKnown RBP eCLIP21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 SYCP1Q15431 976 aa21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 CACNA2D4Q7Z3S7 1137 aa21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 APOBRQ0VD83 1088 aa21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 DRC1Q96MC2 740 aa21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 PRDM11Q9NQV5 511 aa21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 MRC2Q9UBG0 1479 aa21.78■■□□□ 1.08
NPLOC4-201ENST00000331134 YEATS4O95619 227 aa21.77■■□□□ 1.08
NPLOC4-201ENST00000331134 METAP2P50579 478 aaKnown RBP eCLIP21.77■■□□□ 1.08
NPLOC4-201ENST00000331134 TMEM67Q5HYA8 995 aa21.77■■□□□ 1.08
NPLOC4-201ENST00000331134 PHAXQ9H814 394 aaKnown RBP21.77■■□□□ 1.08
NPLOC4-201ENST00000331134 HYPKQ9NX55 129 aa21.77■■□□□ 1.08
NPLOC4-201ENST00000331134 OGFRQ9NZT2 677 aa21.77■■□□□ 1.08
NPLOC4-201ENST00000331134 MTHFSDQ2M296 383 aaKnown RBP21.77■■□□□ 1.08
NPLOC4-201ENST00000331134 PAFAH1B1P43034 410 aa21.77■■□□□ 1.08
NPLOC4-201ENST00000331134 SSRP1Q08945 709 aaKnown RBP21.77■■□□□ 1.08
NPLOC4-201ENST00000331134 BCL2L12Q9HB09 334 aa21.77■■□□□ 1.08
NPLOC4-201ENST00000331134 FAM135AQ9P2D6 1515 aa21.77■■□□□ 1.08
NPLOC4-201ENST00000331134 UTP14AQ9BVJ6 771 aaKnown RBP21.77■■□□□ 1.07
NPLOC4-201ENST00000331134 MNAT1P51948 309 aa21.76■■□□□ 1.07
NPLOC4-201ENST00000331134 STX17P56962 302 aa21.76■■□□□ 1.07
NPLOC4-201ENST00000331134 FSD2A1L4K1 749 aa21.76■■□□□ 1.07
NPLOC4-201ENST00000331134 IFIT5Q13325 482 aaKnown RBP21.76■■□□□ 1.07
NPLOC4-201ENST00000331134 SLC39A6Q13433 755 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms