RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 SCDO00767 359 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 CPSF4O95639 269 aaKnown RBP13□□□□□ -0.33
HDDC2-206ENST00000608461 OXSR1O95747 527 aaPredicted RBP13□□□□□ -0.33
HDDC2-206ENST00000608461 ANGPTL1O95841 491 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 ZCCHC18P0CG32 403 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 RFX3P48380 749 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 ATP4BP51164 291 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 POLR2JP52435 117 aaKnown RBP13□□□□□ -0.33
HDDC2-206ENST00000608461 DGKQP52824 942 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 GRAMD1BQ3KR37 738 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 EMC4Q5J8M3 183 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 DCST2Q5T1A1 773 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 METTL21CQ5VZV1 264 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 AAGABQ6PD74 315 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 MTERF4Q7Z6M4 381 aaKnown RBP13□□□□□ -0.33
HDDC2-206ENST00000608461 ANKRD46Q86W74 232 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 FADS6Q8N9I5 356 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 OR4K17Q8NGC6 315 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 OR4C3Q8NH37 302 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 OR5AK3PQ8NH89 298 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 SLC35G5Q96KT7 338 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 OR7D2Q96RA2 312 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 EBF4Q9BQW3 602 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 SLC35A5Q9BS91 424 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 SLC6A15Q9H2J7 730 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 SERHLQ9NQF3 203 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 POLE3Q9NRF9 147 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 SH3BGRL2Q9UJC5 107 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 TRIM33Q9UPN9 1127 aa13□□□□□ -0.33
HDDC2-206ENST00000608461 USP9YO00507 2555 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-206ENST00000608461 C15orf38-AP3S2A0A0A6YYH1 394 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 C2orf72A6NCS6 295 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 CCDC154A6NI56 674 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 RFXANKO14593 260 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 ADAM10O14672 748 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 NDUFB5O43674 189 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 SCO2O43819 266 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 ZG16O60844 167 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 ZIC2O95409 532 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-206ENST00000608461 KRT75O95678 551 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 CHMP24386 653 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 ACVR2AP27037 513 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 DPP4P27487 766 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 CHI3L1P36222 383 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-206ENST00000608461 TRPC1P48995 793 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 CRYZQ08257 329 aaKnown RBP12.99□□□□□ -0.33
HDDC2-206ENST00000608461 ART3Q13508 389 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 ARHGAP11BQ3KRB8 267 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 ATAD3BQ5T9A4 648 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 FIGNL1Q6PIW4 674 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 ENPP6Q6UWR7 440 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 IFNEQ86WN2 208 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 OR14L1PQ8NHC6 308 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 FBXO30Q8TB52 745 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 DUSP19Q8WTR2 217 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 PMM1Q92871 262 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 ABTB1Q969K4 478 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-206ENST00000608461 ITCHQ96J02 903 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 SDF2Q99470 211 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 TIMP4Q99727 224 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 NMUR2Q9GZQ4 415 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 PRDM14Q9GZV8 571 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 CCDC134Q9H6E4 229 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 PNPLA3Q9NST1 481 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 TAS2R10Q9NYW0 307 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 SPRR3Q9UBC9 169 aa12.99□□□□□ -0.33
HDDC2-206ENST00000608461 MYO7BQ6PIF6 2116 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 H3BNH8 94 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 STX11O75558 287 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 GP1BBP13224 206 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 CPN1P15169 458 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 BMP7P18075 431 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 ZFP36L2P47974 494 aaKnown RBP12.98□□□□□ -0.33
HDDC2-206ENST00000608461 KHKP50053 298 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 ATP12AP54707 1039 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 GFRA1P56159 465 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 RCAN2Q14206 197 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 BCL2A1Q16548 175 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 WIPI1Q5MNZ9 446 aaPredicted RBP12.98□□□□□ -0.33
HDDC2-206ENST00000608461 HEPHL1Q6MZM0 1159 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 B3GNT6Q6ZMB0 384 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 ZNF621Q6ZSS3 439 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 MAMDC2Q7Z304 686 aaPredicted RBP12.98□□□□□ -0.33
HDDC2-206ENST00000608461 MRGPRGQ86SM5 289 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 MARCH3Q86UD3 253 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 OR2M3Q8NG83 312 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 ITLN2Q8WWU7 325 aaPredicted RBP12.98□□□□□ -0.33
HDDC2-206ENST00000608461 MARK4Q96L34 752 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 DSN1Q9H410 356 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 THUMPD1Q9NXG2 353 aaKnown RBP12.98□□□□□ -0.33
HDDC2-206ENST00000608461 COQ3Q9NZJ6 369 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 FLRT3Q9NZU0 649 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 DKKL1Q9UK85 242 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 FBXL2Q9UKC9 423 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 LIPT1Q9Y234 373 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 HRH3Q9Y5N1 445 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 KLF2Q9Y5W3 355 aaPredicted RBP12.98□□□□□ -0.33
HDDC2-206ENST00000608461 DIDO1Q9BTC0 2240 aaKnown RBP12.98□□□□□ -0.33
HDDC2-206ENST00000608461 FREM3P0C091 2139 aa12.98□□□□□ -0.33
HDDC2-206ENST00000608461 DOPEY2Q9Y3R5 2298 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms