RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 IGLV3-32A0A0A0MS00 114 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 RNF103-CHMP3A0A140T963 221 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 DIAPH2O60879 1101 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 UTS2O95399 124 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 TBXA2RP21731 343 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 UQCRC2P22695 453 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 IL12AP29459 219 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 SRD5A2P31213 254 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 S100A3P33764 101 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 PTGER4P35408 488 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 SMSP52788 366 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 IRX1P78414 480 aaPredicted RBP14.72□□□□□ -0.05
LSM4-206ENST00000600289 POU6F2P78424 691 aaPredicted RBP14.72□□□□□ -0.05
LSM4-206ENST00000600289 GRAMD1BQ3KR37 738 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 WLSQ5T9L3 541 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 NXNQ6DKJ4 435 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 VASNQ6EMK4 673 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 TMEM211Q6ICI0 200 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 XKRXQ6PP77 449 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 ACAD11Q709F0 780 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 FAM83FQ8NEG4 500 aaPredicted RBP14.72□□□□□ -0.05
LSM4-206ENST00000600289 OR4A15Q8NGL6 344 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 FBXO30Q8TB52 745 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 ZBTB18Q99592 522 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 CCDC28BQ9BUN5 200 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 PRDM14Q9GZV8 571 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 EXO5Q9H790 373 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 SERHLQ9NQF3 203 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 FLRT3Q9NZU0 649 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 PPP4R1LQ9P1A2 415 aa14.72□□□□□ -0.05
LSM4-206ENST00000600289 ANKHD1Q8IWZ3 2542 aaKnown RBP14.72□□□□□ -0.05
LSM4-206ENST00000600289 A0A1W2PQD3 144 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 C2orf72A6NCS6 295 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 B4DXG7 233 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 ALG1L2C9J202 215 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 UBDO15205 165 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 SLC22A3O75751 556 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 TRAPPC6AO75865 159 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 ACTL6AO96019 429 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 IL6P05231 212 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 PGRP06401 933 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 GABRA1P14867 456 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 ACVR2AP27037 513 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 SOAT1P35610 550 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 ART3Q13508 389 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 GANABQ14697 944 aaKnown RBP14.71□□□□□ -0.05
LSM4-206ENST00000600289 TESK1Q15569 626 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 MSANTD1Q6ZTZ1 278 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 C6orf120Q7Z4R8 191 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 MRGPRGQ86SM5 289 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 MARVELD2Q8N4S9 558 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 OR5AK3PQ8NH89 298 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 ADAMTS15Q8TE58 950 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 JADE3Q92613 823 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 CDS1Q92903 461 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 OR7D2Q96RA2 312 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 TCF7L2Q9NQB0 619 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 ACAD8Q9UKU7 415 aa14.71□□□□□ -0.05
LSM4-206ENST00000600289 KLF2Q9Y5W3 355 aaPredicted RBP14.71□□□□□ -0.05
LSM4-206ENST00000600289 DUXAA6NLW8 204 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 POLR3GO15318 223 aaPredicted RBP14.7□□□□□ -0.06
LSM4-206ENST00000600289 SCO2O43819 266 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 OXSR1O95747 527 aaPredicted RBP14.7□□□□□ -0.06
LSM4-206ENST00000600289 AK1P00568 194 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 GUSBP08236 651 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 GCKP35557 465 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 ZFP36L2P47974 494 aaKnown RBP14.7□□□□□ -0.06
LSM4-206ENST00000600289 TRPC1P48995 793 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 IDH3AP50213 366 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 DSCR4P56555 118 aaPredicted RBP14.7□□□□□ -0.06
LSM4-206ENST00000600289 NME5P56597 212 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 C17orf67Q0P5P2 114 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 EIPR1Q53HC9 387 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 WIPI1Q5MNZ9 446 aaPredicted RBP14.7□□□□□ -0.06
LSM4-206ENST00000600289 AP1ARQ63HQ0 302 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 SAXO2Q658L1 398 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 FIGNL1Q6PIW4 674 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 ANKRD46Q86W74 232 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 MISPQ8IVT2 679 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 PM20D2Q8IYS1 436 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 CHDHQ8NE62 594 aaPredicted RBP14.7□□□□□ -0.06
LSM4-206ENST00000600289 OR2M3Q8NG83 312 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 NEURL3Q96EH8 262 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 SLC35G5Q96KT7 338 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 LURAP1Q96LR2 239 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 TIMP4Q99727 224 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 SIKE1Q9BRV8 207 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 YIPF4Q9BSR8 244 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 TBL1XR1Q9BZK7 514 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 RTN4RQ9BZR6 473 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 SERHL2Q9H4I8 314 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 UBQLN4Q9NRR5 601 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 FBXL2Q9UKC9 423 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 FAM215AQ9Y5M1 114 aa14.7□□□□□ -0.06
LSM4-206ENST00000600289 C15orf38-AP3S2A0A0A6YYH1 394 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 ANGPTL1O95841 491 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 AGR2O95994 175 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 HOXB4P17483 251 aaPredicted RBP14.69□□□□□ -0.06
LSM4-206ENST00000600289 BMP7P18075 431 aa14.69□□□□□ -0.06
LSM4-206ENST00000600289 MATN1P21941 496 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms