RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 KAT7O95251 611 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 ERGP11308 486 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 GALP22466 123 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 SSTR2P30874 369 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 BTCP35070 178 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 RPL3P39023 403 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 AVPR1BP47901 424 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 TAS2R38P59533 333 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 MC1RQ01726 317 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 C2orf80Q0P641 193 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 LRRC32Q14392 662 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 IER5LQ5T953 404 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 DGLUCYQ7Z3D6 616 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 HSD17B13Q7Z5P4 300 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 LRRTM4Q86VH4 590 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 LRRC28Q86X40 367 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 FAM129CQ86XR2 697 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 NAGSQ8N159 534 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 OXR1Q8N573 874 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 C2orf73Q8N5S3 287 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 EIF4E3Q8N5X7 224 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 TFGQ92734 400 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 PPCDCQ96CD2 204 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 THAP7Q9BT49 309 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 LGR4Q9BXB1 951 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 ACTR6Q9GZN1 396 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 NUDT15Q9NV35 164 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 MRPS18AQ9NVS2 196 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 REV1Q9UBZ9 1251 aa13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 TESQ9UGI8 421 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-220ENST00000560998 TRPM6Q9BX84 2022 aa13.08□□□□□ -0.31
RABGGTA-220ENST00000560998 MID1O15344 667 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 SLC28A2O43868 658 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 C6orf47O95873 294 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 KLK1P06870 262 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 FGF2P09038 288 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 LBX1P52954 281 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 MVDP53602 400 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 TAS2R50P59544 299 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 HBA1P69905 142 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 FABP5Q01469 135 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 COX10Q12887 443 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 MADCAM1Q13477 382 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 CCDC85BQ15834 202 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 MPEG1Q2M385 716 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 CRB2Q5IJ48 1285 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 GCNT6Q5T4J0 391 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 PAQR6Q6TCH4 344 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 TMIGD1Q6UXZ0 262 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 ZNF852Q6ZMS4 543 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 C3P1Q6ZMU1 363 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 SLC30A8Q8IWU4 369 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 SYT14Q8NB59 555 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 ATOH1Q92858 354 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 MAL2Q969L2 176 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 SECISBP2Q96T21 854 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 C7orf50Q9BRJ6 194 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 PLA2G2FQ9BZM2 168 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 TMEM38AQ9H6F2 299 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 FGF20Q9NP95 211 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 TM7SF3Q9NS93 570 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 ZSCAN32Q9NX65 697 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 EXTL2Q9UBQ6 330 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 CBLCQ9ULV8 474 aa13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 EXOSC1Q9Y3B2 195 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-220ENST00000560998 PRSS44E7EML9 344 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 AGRPO00253 132 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 GPR37L1O60883 481 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 CXCL3P19876 107 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 TNFRSF1BP20333 461 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 AHCYP23526 432 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 ETV5P41161 510 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 OR1E2P47887 323 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 RFX3P48380 749 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 XKP51811 444 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 GPR85P60893 370 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 CSTF1Q05048 431 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 OPCMLQ14982 345 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 ARHGAP19Q14CB8 494 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 PRSS53Q2L4Q9 553 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 COX20Q5RI15 118 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 C9orf50Q5SZB4 431 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 AGBL4Q5VU57 503 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 METRNLQ641Q3 311 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 FAM198BQ6UWH4 519 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 WASH2PQ6VEQ5 465 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 RASSF6Q6ZTQ3 369 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 KRT78Q8N1N4 520 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 FANK1Q8TC84 345 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 PCNPQ8WW12 178 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 KCTD12Q96CX2 325 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 NPAS1Q99742 590 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 POLDIP3Q9BY77 421 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 CYSLTR2Q9NS75 346 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 GPATCH2Q9NW75 528 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 YBX2Q9Y2T7 364 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 DNMT3AQ9Y6K1 912 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 DOCK8Q8NF50 2099 aa13.07□□□□□ -0.32
RABGGTA-220ENST00000560998 PRAMEF25A6NGN4 478 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms