RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 CHERPQ8IWX8 916 aaKnown RBP12.39□□□□□ -0.43
SHMT2-228ENST00000557302 OR4K17Q8NGC6 315 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 OR4C3Q8NH37 302 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 PNPT1Q8TCS8 783 aaKnown RBP12.39□□□□□ -0.43
SHMT2-228ENST00000557302 ZFP90Q8TF47 636 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 XAGE5Q8WWM1 108 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 RAB8BQ92930 207 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 SDF2Q99470 211 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 HOXD1Q9GZZ0 328 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 SLC6A15Q9H2J7 730 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 HHATLQ9HCP6 504 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 SLC52A3Q9NQ40 469 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 SLC6A13Q9NSD5 602 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 ZNF835Q9Y2P0 537 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 HRH3Q9Y5N1 445 aa12.39□□□□□ -0.43
SHMT2-228ENST00000557302 USP9XQ93008 2570 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-228ENST00000557302 MAST4O15021 2626 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 A0A096LPI6 279 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 A0A1W2PP18 115 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 HMGN4O00479 90 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 SCDO00767 359 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 AQP7O14520 342 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 PRRG2O14669 202 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 ADAM10O14672 748 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 ZNHIT1O43257 154 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 STX11O75558 287 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 AGFG2O95081 481 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 ANGPTL1O95841 491 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 C1QCP02747 245 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 DCTP40126 519 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 MAGEA8P43361 318 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 HPCAP84074 193 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 C17orf67Q0P5P2 114 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 C3AR1Q16581 482 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 ARHGAP11BQ3KRB8 267 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 GTDC1Q4AE62 458 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 FLYWCH1Q4VC44 716 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 C4orf17Q53FE4 359 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 C1QL3Q5VWW1 255 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 HEPHL1Q6MZM0 1159 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 APOOLQ6UXV4 268 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 Q6ZPB1 254 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-228ENST00000557302 FAM26EQ8N5C1 309 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 ZNF527Q8NB42 609 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 DUSP19Q8WTR2 217 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 RTN4RQ9BZR6 473 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 PAIP1Q9H074 479 aaKnown RBP12.38□□□□□ -0.43
SHMT2-228ENST00000557302 TPT1P8Q9HAU6 139 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 SH3BGRL2Q9UJC5 107 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 DKKL1Q9UK85 242 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 FBXL2Q9UKC9 423 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 SLC5A6Q9Y289 635 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 PCDHB14Q9Y5E9 798 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 ZNF407Q9C0G0 2248 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 HECTD1Q9ULT8 2610 aa12.38□□□□□ -0.43
SHMT2-228ENST00000557302 NPIPA5A0A0B4J1W7 369 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 A0A1B0GUH1 482 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 A0A1W2PQD3 144 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 OR14I1A6ND48 311 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 C17orf51A8MQB3 221 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 NPIPA2E9PIF3 369 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 NPIPA7E9PJI5 369 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 NPIPA3F8WFD2 350 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 BCKDKO14874 412 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 ANGPT2O15123 496 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 LRRTM2O43300 516 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 NDUFB5O43674 189 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 SEMA7AO75326 666 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 TPOP07202 933 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 NPIPA8P0DM63 369 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 CD1EP15812 388 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 SRD5A2P31213 254 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 LSP1P33241 339 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 GCKP35557 465 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 CA7P43166 264 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 SEC24CP53992 1094 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 ATP12AP54707 1039 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 GYS2P54840 703 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 GNGT1P63211 74 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 PAGE3Q5JUK9 113 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 COX20Q5RI15 118 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.37□□□□□ -0.43
SHMT2-228ENST00000557302 LRIF1Q5T3J3 769 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 YRDCQ86U90 279 aaKnown RBP12.37□□□□□ -0.43
SHMT2-228ENST00000557302 FJX1Q86VR8 437 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 MISPQ8IVT2 679 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 FADS6Q8N9I5 356 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 FAM83FQ8NEG4 500 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-228ENST00000557302 NEIL3Q8TAT5 605 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 FAM57AQ8TBR7 257 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 TSPEARQ8WU66 669 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 C10orf82Q8WW14 230 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 SARAFQ96BY9 339 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 ROPN1LQ96C74 230 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 AURKBQ96GD4 344 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-228ENST00000557302 OR2B2Q9GZK3 357 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 ZNF350Q9GZX5 532 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 NSRP1Q9H0G5 558 aaKnown RBP12.37□□□□□ -0.43
SHMT2-228ENST00000557302 DSN1Q9H410 356 aa12.37□□□□□ -0.43
SHMT2-228ENST00000557302 RAD21L1Q9H4I0 556 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms