RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 MASP1P48740 699 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 NUDT2P50583 147 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 RASSF2P50749 326 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 RPS26P62854 115 aaKnown RBP16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 CYP51A1Q16850 503 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 HYAL4Q2M3T9 481 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 MDGA2Q7Z553 956 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 WDR53Q7Z5U6 358 aaPredicted RBP16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 ZNF227Q86WZ6 799 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 SULF2Q8IWU5 870 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 MSRB3Q8IXL7 192 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 PEX5LQ8IYB4 626 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 CLEC4FQ8N1N0 589 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 ZNF619Q8N2I2 560 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 POU5F2Q8N7G0 328 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 OR5M3Q8NGP4 307 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 BBS10Q8TAM1 723 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 PNPT1Q8TCS8 783 aaKnown RBP16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 RNF138Q8WVD3 245 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 ZNF607Q96SK3 696 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 MFRPQ9BY79 579 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 KAT8Q9H7Z6 458 aaKnown RBP16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 PTGES2Q9H7Z7 377 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 IL1RL2Q9HB29 575 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 BCL2L10Q9HD36 194 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 ZFP64Q9NPA5 681 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 KLHL1Q9NR64 748 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 ZNF232Q9UNY5 417 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 ANGPT4Q9Y264 503 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 IFT52Q9Y366 437 aa16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.06■□□□□ 0.16
CLSTN3-210ENST00000540931 FADS1O60427 444 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 ICOSLGO75144 302 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 TNFRSF21O75509 655 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 CBR3O75828 277 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 ATP5HO75947 161 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 SORBS2O94875 1100 aaKnown RBP16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 F10P00742 488 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 TFPTP0C1Z6 253 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 CCL3P10147 92 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 ETFAP13804 333 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 ETS2P15036 469 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 DCTP40126 519 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 ADH7P40394 386 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 CD97P48960 835 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 MXRA7P84157 204 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 NFATC3Q12968 1075 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 ZNF141Q15928 474 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 GTDC1Q4AE62 458 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 NADK2Q4G0N4 442 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 KRTCAP3Q53RY4 240 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 REEP3Q6NUK4 255 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 FIGNL1Q6PIW4 674 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 ARHGAP24Q8N264 748 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 AMER2Q8N7J2 671 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 OR2M7Q8NG81 312 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 RASSF5Q8WWW0 418 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 RAB8BQ92930 207 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 AURKBQ96GD4 344 aaPredicted RBP16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 SERHL2Q9H4I8 314 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 SPAG4Q9NPE6 437 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 SLC35A3Q9Y2D2 325 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 DTNAQ9Y4J8 743 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 WIF1Q9Y5W5 379 aa16.05■□□□□ 0.16
CLSTN3-210ENST00000540931 TNRC6AQ8NDV7 1962 aaKnown RBP16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 PRORSD1PA6NEY8 169 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 TTLL8A6PVC2 850 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 NDUFB5O43674 189 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 KIAA0513O60268 411 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 SERPINB7O75635 380 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 H6PDO95479 791 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 IFNA14P01570 189 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 DBIP07108 87 aaKnown RBP16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 ARAFP10398 606 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 GCKP35557 465 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 MEOX1P50221 254 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 CDK6Q00534 326 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 PLGLB1Q02325 96 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 VEZF1Q14119 521 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 GANABQ14697 944 aaKnown RBP16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 LARS2Q15031 903 aaKnown RBP16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 COX20Q5RI15 118 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 NET1Q7Z628 596 aaPredicted RBP16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 HIPK4Q8NE63 616 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 TOR1AIP2Q8NFQ8 470 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 OR1J4Q8NGS1 313 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 SLC38A5Q8WUX1 472 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 C1orf21Q9H246 121 aa16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 MRPS18CQ9Y3D5 142 aaKnown RBP16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 TLN1Q9Y490 2541 aaKnown RBP16.04■□□□□ 0.16
CLSTN3-210ENST00000540931 FXYD1O00168 92 aa16.03■□□□□ 0.16
CLSTN3-210ENST00000540931 EIF4E2O60573 245 aaKnown RBP16.03■□□□□ 0.16
CLSTN3-210ENST00000540931 TRIM3O75382 744 aaPredicted RBP16.03■□□□□ 0.16
CLSTN3-210ENST00000540931 NME6O75414 186 aaPredicted RBP16.03■□□□□ 0.16
CLSTN3-210ENST00000540931 OXSR1O95747 527 aaPredicted RBP16.03■□□□□ 0.16
CLSTN3-210ENST00000540931 BCHEP06276 602 aa16.03■□□□□ 0.16
CLSTN3-210ENST00000540931 ZNF24P17028 368 aa16.03■□□□□ 0.16
CLSTN3-210ENST00000540931 ALDH6A1Q02252 535 aaKnown RBP16.03■□□□□ 0.16
CLSTN3-210ENST00000540931 GRAMD1BQ3KR37 738 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms