RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 C3orf56Q8N813 242 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 FBXO36Q8NEA4 188 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 TRIM58Q8NG06 486 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 OR9A2Q8NGT5 310 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 OR2V1Q8NHB1 315 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 ZNF675Q8TD23 568 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 ABHD3Q8WU67 409 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 KAT2AQ92830 837 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 LRRC39Q96DD0 335 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 ADGRG7Q96K78 797 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 UBXN10Q96LJ8 280 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 ATOH8Q96SQ7 321 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 NPAP1Q9NZP6 1156 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 POU2F3Q9UKI9 436 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 DYSFO75923 2080 aa9.3□□□□□ -0.92
CLDND1-231ENST00000515620 E7EQL1 145 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 PGRMC1O00264 195 aaKnown RBP9.29□□□□□ -0.92
CLDND1-231ENST00000515620 UGDHO60701 494 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 BCAS2O75934 225 aaPredicted RBP9.29□□□□□ -0.92
CLDND1-231ENST00000515620 LYZL6O75951 148 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 CTAGE8P0CG41 777 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 COL6A2P12110 1019 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 ZNF17P17021 662 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 SRP14P37108 136 aaKnown RBP9.29□□□□□ -0.92
CLDND1-231ENST00000515620 EFNA4P52798 201 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 RAB10P61026 200 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 ACTG1P63261 375 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 SPOCK1Q08629 439 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 DLG1Q12959 904 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 ITGADQ13349 1161 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 FASTKD3Q14CZ7 662 aaKnown RBP9.29□□□□□ -0.92
CLDND1-231ENST00000515620 ZKSCAN8Q15776 578 aaPredicted RBP9.29□□□□□ -0.92
CLDND1-231ENST00000515620 PDLIM3Q53GG5 364 aaPredicted RBP9.29□□□□□ -0.92
CLDND1-231ENST00000515620 HBMQ6B0K9 141 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 SLC22A25Q6T423 547 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 COMMD6Q7Z4G1 85 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 ISCA2Q86U28 154 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 CTAGE4Q8IX94 777 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 L3MBTL4Q8NA19 623 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 OR2W6PQ8NHA6 318 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 ZNF681Q96N22 645 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 CDK15Q96Q40 435 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 GPR22Q99680 433 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 NPAS1Q99742 590 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 DHRS9Q9BPW9 319 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 USB1Q9BQ65 265 aaKnown RBP9.29□□□□□ -0.92
CLDND1-231ENST00000515620 IPPKQ9H8X2 491 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 FAM120CQ9NX05 1096 aaKnown RBP9.29□□□□□ -0.92
CLDND1-231ENST00000515620 TXNDC16Q9P2K2 825 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 KLHL13Q9P2N7 655 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 UTS2RQ9UKP6 389 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 PSME2Q9UL46 239 aa9.29□□□□□ -0.92
CLDND1-231ENST00000515620 IGHV4-61A0A0C4DH41 118 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 A0A0J9YW62 118 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 ADAMDEC1O15204 470 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 NDUFB5O43674 189 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 VENTXO95231 258 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 GFAPP14136 432 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 NR4A2P43354 598 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 RFX3P48380 749 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 CLK3P49761 638 aaKnown RBP9.28□□□□□ -0.92
CLDND1-231ENST00000515620 FABP6P51161 128 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 ARL4CP56559 192 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 ILF2Q12905 390 aaKnown RBP9.28□□□□□ -0.92
CLDND1-231ENST00000515620 PDIA2Q13087 525 aaKnown RBP9.28□□□□□ -0.92
CLDND1-231ENST00000515620 GTF2H2Q13888 395 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 MORF4L2Q15014 288 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 ACAP2Q15057 778 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 CARTPTQ16568 116 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 ZNF239Q16600 458 aaKnown RBP9.28□□□□□ -0.92
CLDND1-231ENST00000515620 PFKFB4Q16877 469 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 FRG2Q64ET8 278 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 TTC19Q6DKK2 380 aaPredicted RBP9.28□□□□□ -0.92
CLDND1-231ENST00000515620 GTF2IRD2BQ6EKJ0 949 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 GTF2H2CQ6P1K8 395 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 B3GLCTQ6Y288 498 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 Q6ZSR9 355 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 RAPH1Q70E73 1250 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 GOLGA7Q7Z5G4 137 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 GTF2IRD2Q86UP8 949 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 TDRPQ86YL5 185 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 TUSC5Q8IXB3 177 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 CCDC116Q8IYX3 515 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 METTL4Q8N3J2 472 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 RNF128Q8TEB7 428 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 SLC9A6Q92581 669 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 ERP27Q96DN0 273 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 MUCL1Q96DR8 90 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 MTBPQ96DY7 904 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 REXO5Q96IC2 774 aaKnown RBP9.28□□□□□ -0.92
CLDND1-231ENST00000515620 RNF145Q96MT1 663 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 FRG2BQ96QU4 278 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 RBBP8Q99708 897 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 PIMREGQ9BSJ6 248 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 FAIM2Q9BWQ8 316 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 TBL1XR1Q9BZK7 514 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 NMRAL1Q9HBL8 299 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 AHSPQ9NZD4 102 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 SENP1Q9P0U3 644 aa9.28□□□□□ -0.92
CLDND1-231ENST00000515620 PLCE1Q9P212 2302 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms