RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 RFXAPO00287 272 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 GOSR2O14653 212 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 ZNF780AO75290 641 aaPredicted RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 CERS1P27544 350 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 HTR3AP46098 478 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 TAS2R20P59543 309 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 ZNF33BQ06732 778 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 UMODL1-AS1Q8N2C9 162 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 GLIS1Q8NBF1 620 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 MAGIXQ9H6Y5 334 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 PRMT8Q9NR22 394 aaPredicted RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 TAS2R8Q9NYW2 309 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 SIT1Q9Y3P8 196 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 HSPB11Q9Y547 144 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 MAGED1Q9Y5V3 778 aaPredicted RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 FAM230AA0A1W2PPH8 454 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 SLC34A2O95436 690 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 AMY2AP04746 511 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 PRKXP51817 358 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 WDR4P57081 412 aaKnown RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 MSS51Q4VC12 460 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 NDUFAF5Q5TEU4 345 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 PLBD1Q6P4A8 553 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 Q8N402 240 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 OR52N2Q8NGI0 321 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 DDX1Q92499 740 aaKnown RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 FBXL8Q96CD0 374 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 LMF1Q96S06 567 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 SPIN2AQ99865 258 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 SPIN2BQ9BPZ2 258 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 CHRDQ9H2X0 955 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 CUTCQ9NTM9 273 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 SDHAF2Q9NX18 166 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 LSM5Q9Y4Y9 91 aaKnown RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 NSG1A0A0A6YYJ2 146 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 H0YAE9 185 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 FOXE1O00358 373 aaPredicted RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 NUDT21O43809 227 aaKnown RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 HTR1EP28566 365 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 CX3CR1P49238 355 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 ZNF808Q8N4W9 903 aaPredicted RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 TOE1Q96GM8 510 aaKnown RBP8.23□□□□□ -1.09
HPS4-209ENST00000466781 WBP1LQ9NX94 342 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 PISDQ9UG56 409 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 SLC7A7Q9UM01 511 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 ERVK-19Q9WJR5 959 aa8.23□□□□□ -1.09
HPS4-209ENST00000466781 K7ERQ8 282 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 BCAS1O75363 584 aaPredicted RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 HEXAP06865 529 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 BPIP17213 487 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 CD6P30203 668 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 PBX2P40425 430 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 SLC18A1P54219 525 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 ADARB1P78563 741 aaKnown RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 ZNF704Q6ZNC4 412 aaPredicted RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 GPR149Q86SP6 731 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 TMEM150AQ86TG1 271 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 TMEM25Q86YD3 366 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 OR14K1Q8NGZ2 314 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 LRR1Q96L50 414 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 DPH2Q9BQC3 489 aaPredicted RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 XYLT2Q9H1B5 865 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 ERVK13-1Q9NX77 482 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 TMEM184BQ9Y519 407 aaPredicted RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 C17orf113A0A1B0GUU1 675 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 CD300LBA8K4G0 201 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 H7C2Y5 167 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 RAB3BP20337 219 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 IDUAP35475 653 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 CLCN2P51788 898 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 GRB7Q14451 532 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 NIPAL3Q6P499 406 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 BPHLQ86WA6 291 aaPredicted RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 ACBD7Q8N6N7 88 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 OR4K15Q8NH41 348 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 OR51Q1Q8NH59 317 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 FGF13Q92913 245 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 SDSLQ96GA7 329 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 OR14A2Q96R54 314 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 MMP27Q9H306 513 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 GCM1Q9NP62 436 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 POLHQ9Y253 713 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 YARS2Q9Y2Z4 477 aaKnown RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 A0A1B0GUL6 1792 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 BLACEA4D250 179 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 CDC14CA4D256 554 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 MAP2K3P46734 347 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 CDKN2DP55273 166 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 ZNF181Q2M3W8 571 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 FCRLBQ6BAA4 426 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 OR8J1Q8NGP2 316 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 SFXN5Q8TD22 340 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 TAAR8Q969N4 342 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 TMEM19Q96HH6 336 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 FCRL3Q96P31 734 aaPredicted RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 MYADMQ96S97 322 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 PFDN5Q99471 154 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 TSNAXQ99598 290 aaKnown RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 STARD5Q9NSY2 213 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 MYEF2Q9P2K5 600 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms