RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 ABT1Q9ULW3 272 aaKnown RBP17.24■□□□□ 0.35
HPS3-204ENST00000462030 GPR34Q9UPC5 381 aa17.24■□□□□ 0.35
HPS3-204ENST00000462030 HCFC2Q9Y5Z7 792 aa17.24■□□□□ 0.35
HPS3-204ENST00000462030 SYT5O00445 386 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 CDC42EP2O14613 210 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 DRD2P14416 443 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 ENPP1P22413 925 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 RBMS1P29558 406 aaKnown RBP17.23■□□□□ 0.35
HPS3-204ENST00000462030 RFX3P48380 749 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 STXBP1P61764 594 aaKnown RBP17.23■□□□□ 0.35
HPS3-204ENST00000462030 TMEM44Q2T9K0 475 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 ARHGAP15Q53QZ3 475 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 C6orf132Q5T0Z8 1188 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 CXXC5Q7LFL8 322 aaKnown RBP17.23■□□□□ 0.35
HPS3-204ENST00000462030 OR5K2Q8NHB8 316 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 ACOT11Q8WXI4 607 aaPredicted RBP17.23■□□□□ 0.35
HPS3-204ENST00000462030 ALG8Q9BVK2 526 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 MARK1Q9P0L2 795 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 KCNN3Q9UGI6 736 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 IRAK3Q9Y616 596 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 LINC00862A6NCI5 91 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 KLF4O43474 513 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 ZIC2O95409 532 aaPredicted RBP17.23■□□□□ 0.35
HPS3-204ENST00000462030 GALP22466 123 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 CSNK1G2P78368 415 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 GNA13Q14344 377 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 PLBD1Q6P4A8 553 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 TMEM64Q6YI46 380 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 PLEKHM3Q6ZWE6 761 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 FAM20CQ8IXL6 584 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 HEXA-AS1Q9H8Q6 139 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 EMC7Q9NPA0 242 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 MED17Q9NVC6 651 aa17.23■□□□□ 0.35
HPS3-204ENST00000462030 LOC105369274A0A096LPK9 316 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 GCGRP47871 477 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 RNF144AP50876 292 aaPredicted RBP17.22■□□□□ 0.35
HPS3-204ENST00000462030 SFXN4Q6P4A7 337 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 ARL9Q6T311 187 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 GDF7Q7Z4P5 450 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 AMZ2Q86W34 360 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 OR4N4Q8N0Y3 316 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 LINC01555Q8NAE3 123 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 OR6C4Q8NGE1 309 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 OR8K5Q8NH50 307 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 PCNPQ8WW12 178 aaKnown RBP17.22■□□□□ 0.35
HPS3-204ENST00000462030 CCDC120Q96HB5 630 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 MS4A3Q96HJ5 214 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 TEX12Q9BXU0 123 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 BABAM2Q9NXR7 383 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 MAFFQ9ULX9 164 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 ATG4BQ9Y4P1 393 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 SPEF1Q9Y4P9 236 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 A0A1W2PR48 441 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 LRIT2A6NDA9 550 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 E9PI62 339 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 NFATC1O95644 943 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 RAF1P04049 648 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 M6PRP20645 277 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 ACSL1P33121 698 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 SLC36A2Q495M3 483 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 LYPD4Q6UWN0 246 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 GLRX5Q86SX6 157 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 ACBD7Q8N6N7 88 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 OR2T33Q8NG76 320 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 CD99L2Q8TCZ2 262 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 JAM3Q9BX67 310 aa17.22■□□□□ 0.35
HPS3-204ENST00000462030 RANBP3Q9H6Z4 567 aaPredicted RBP17.22■□□□□ 0.35
HPS3-204ENST00000462030 HMX1Q9NP08 348 aaPredicted RBP17.22■□□□□ 0.35
HPS3-204ENST00000462030 IGKV1-8A0A0C4DH67 115 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 B8ZZF3 427 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 TPOP07202 933 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 ANXA3P12429 323 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 HOXB3P14651 431 aaPredicted RBP17.21■□□□□ 0.35
HPS3-204ENST00000462030 FUT1P19526 365 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 NPR2P20594 1047 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 MC3RP41968 323 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 ANXA11P50995 505 aaKnown RBP17.21■□□□□ 0.35
HPS3-204ENST00000462030 RGS8P57771 180 aaPredicted RBP17.21■□□□□ 0.35
HPS3-204ENST00000462030 TRA2BP62995 288 aaKnown RBP17.21■□□□□ 0.35
HPS3-204ENST00000462030 RGS1Q08116 209 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 DECR1Q16698 335 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 SLC25A35Q3KQZ1 300 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 IDO2Q6ZQW0 420 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 SPERTQ8NA61 448 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 KREMEN2Q8NCW0 462 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 C7orf57Q8NEG2 295 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 TRMT10AQ8TBZ6 339 aaKnown RBP17.21■□□□□ 0.35
HPS3-204ENST00000462030 SFXN5Q8TD22 340 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 MCHR1Q99705 422 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 FAIM2Q9BWQ8 316 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 OR51J1Q9H342 316 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 DPAGT1Q9H3H5 408 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.21■□□□□ 0.35
HPS3-204ENST00000462030 MRPL39Q9NYK5 338 aaKnown RBP17.21■□□□□ 0.35
HPS3-204ENST00000462030 CLEC4AQ9UMR7 237 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 SATB2Q9UPW6 733 aa17.21■□□□□ 0.35
HPS3-204ENST00000462030 A0A0G2JK05 382 aa17.21■□□□□ 0.34
HPS3-204ENST00000462030 TEX13CA0A0J9YWL9 993 aa17.21■□□□□ 0.34
HPS3-204ENST00000462030 FCMRO60667 390 aa17.21■□□□□ 0.34
HPS3-204ENST00000462030 MOSPD3O75425 235 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms