RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 SPRYD4Q8WW59 207 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 DIO2Q92813 273 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 PMM1Q92871 262 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 SNAPC3Q92966 411 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 VOPP1Q96AW1 172 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLC22A18Q96BI1 424 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 TCEAL4Q96EI5 215 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 TRMT61AQ96FX7 289 aaKnown RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 COX14Q96I36 57 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 RNF170Q96K19 258 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 HS6ST2Q96MM7 605 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZSWIM3Q96MP5 696 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 LRFN5Q96NI6 719 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 FYTTD1Q96QD9 318 aaKnown RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 GFM1Q96RP9 751 aaKnown RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 UBL7Q96S82 380 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 CD180Q99467 661 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 MARVELD1Q9BSK0 173 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 YIPF4Q9BSR8 244 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 THAP7Q9BT49 309 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 WACQ9BTA9 647 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 TRMT61BQ9BVS5 477 aaKnown RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 IFT27Q9BW83 186 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 C1QTNF2Q9BXJ5 285 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 HDHD5Q9BXW7 423 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 BEX2Q9BXY8 128 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 PLA2G12AQ9BZM1 189 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 SPRTNQ9H040 489 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLITRK2Q9H156 845 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 LINC00597Q9H2U6 94 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 LRRN3Q9H3W5 708 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 MTG2Q9H4K7 406 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 EGLN3Q9H6Z9 239 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 MTHFD2LQ9H903 347 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLC28A3Q9HAS3 691 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 TMEM27Q9HBJ8 222 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 EQTNQ9NQ60 294 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 PRDM9Q9NQV7 894 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 KLHL1Q9NR64 748 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 CTPS2Q9NRF8 586 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 POLE3Q9NRF9 147 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 MAN2C1Q9NTJ4 1040 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 SEMA4GQ9NTN9 838 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 IMP3Q9NV31 184 aaKnown RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 MCUBQ9NWR8 336 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 HCFC1R1Q9NWW0 138 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 BABAM2Q9NXR7 383 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 B3GNT2Q9NY97 397 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 IL20Q9NYY1 176 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 CNIH4Q9P003 139 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 ABRACLQ9P1F3 81 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 C5AR2Q9P296 337 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 RPS6KB2Q9UBS0 482 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 DUX4Q9UBX2 424 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 MOSPD1Q9UJG1 213 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF222Q9UK12 451 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 SLC7A7Q9UM01 511 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZFR2Q9UPR6 939 aaKnown RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 GPR52Q9Y2T5 361 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 YARS2Q9Y2Z4 477 aaKnown RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 SF3B6Q9Y3B4 125 aaKnown RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 MRPS23Q9Y3D9 190 aaKnown RBP3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 RWDD3Q9Y3V2 267 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 WDR45Q9Y484 360 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 HSPB11Q9Y547 144 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 IRAK3Q9Y616 596 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 CLCA3PQ9Y6N3 262 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 SESN1Q9Y6P5 492 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 COLEC10Q9Y6Z7 277 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 LTBP2Q14767 1821 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 NINQ8N4C6 2090 aa3.12□□□□□ -1.91
HMGN1P18-201ENST00000457642 NUP210Q8TEM1 1887 aaPredicted RBP3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 MTCL1Q9Y4B5 1905 aaKnown RBP3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 TBC1D3EA0A087X179 549 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 A0A0G2JN53 185 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 LOC102723532A0A0G2JNH3 316 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 A0A1W2PPV9 198 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 SMIM30A4D0T7 59 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 ANKRD61A6NGH8 418 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 TUBAL3A6NHL2 446 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 A6NL46 340 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 C12orf71A8MTZ7 269 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 ZNF879B4DU55 563 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 K7ESM1 405 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 FLRT2O43155 660 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 SPINT1O43278 529 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 EEF1E1O43324 174 aaKnown RBP3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 NDUFB5O43674 189 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 GPRIN2O60269 458 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 GATBO75879 557 aaKnown RBP3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 NCR1O76036 304 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 KLHL18O94889 574 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 UBL3O95164 117 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 CH25HO95992 272 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 APODP05090 189 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 ASGR2P07307 311 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 IFI6P09912 130 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 H2AFB2P0C5Z0 115 aa3.11□□□□□ -1.91
HMGN1P18-201ENST00000457642 CISD3P0C7P0 127 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms