RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.07□□□□□ -0.48
SHC1-210ENST00000448116 FAM181AQ8N9Y4 354 aa12.07□□□□□ -0.48
SHC1-210ENST00000448116 KCT2Q8NC54 265 aa12.07□□□□□ -0.48
SHC1-210ENST00000448116 SIMC1Q8NDZ2 872 aa12.07□□□□□ -0.48
SHC1-210ENST00000448116 OR52E1Q8NGJ3 308 aa12.07□□□□□ -0.48
SHC1-210ENST00000448116 OSTF1Q92882 214 aa12.07□□□□□ -0.48
SHC1-210ENST00000448116 ELP4Q96EB1 424 aa12.07□□□□□ -0.48
SHC1-210ENST00000448116 ATF6BQ99941 703 aa12.07□□□□□ -0.48
SHC1-210ENST00000448116 CAPN10Q9HC96 672 aa12.07□□□□□ -0.48
SHC1-210ENST00000448116 CLEC4AQ9UMR7 237 aa12.07□□□□□ -0.48
SHC1-210ENST00000448116 CHD7Q9P2D1 2997 aa12.07□□□□□ -0.48
SHC1-210ENST00000448116 PLOD3O60568 738 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 NFATC1O95644 943 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 EVI2BP34910 448 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 OMPP47874 163 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 RFX3P48380 749 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 TRA2BP62995 288 aaKnown RBP12.06□□□□□ -0.48
SHC1-210ENST00000448116 HTRA3P83110 453 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 ID2Q02363 134 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 MLC1Q15049 377 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 SIGIRRQ6IA17 410 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 MZT2AQ6P582 158 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 CADM2Q8N3J6 435 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 DIO2Q92813 273 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 FGF11Q92914 225 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 SENP5Q96HI0 755 aaPredicted RBP12.06□□□□□ -0.48
SHC1-210ENST00000448116 PAWRQ96IZ0 340 aaKnown RBP12.06□□□□□ -0.48
SHC1-210ENST00000448116 MED18Q9BUE0 208 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 BTBD1Q9H0C5 482 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 NT5DC2Q9H857 520 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 HINT3Q9NQE9 182 aaKnown RBP12.06□□□□□ -0.48
SHC1-210ENST00000448116 EXTL2Q9UBQ6 330 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 SLC7A7Q9UM01 511 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 INSL6Q9Y581 213 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 A0A1W2PP55 124 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 REM1O75628 298 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 TMEM35AQ53FP2 167 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 RNASE12Q5GAN4 147 aaKnown RBP12.06□□□□□ -0.48
SHC1-210ENST00000448116 GALNT6Q8NCL4 622 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 CDS1Q92903 461 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 SLC41A3Q96GZ6 507 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 CITED4Q96RK1 184 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 PPP1R3EQ9H7J1 279 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 SLC6A20Q9NP91 592 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 ACSL5Q9ULC5 683 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.06□□□□□ -0.48
SHC1-210ENST00000448116 C12orf71A8MTZ7 269 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 KDM4EB2RXH2 506 aaPredicted RBP12.06□□□□□ -0.48
SHC1-210ENST00000448116 SURF4O15260 269 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 ARHGEF9O43307 516 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 NARSO43776 548 aaKnown RBP12.06□□□□□ -0.48
SHC1-210ENST00000448116 TSC22D2O75157 780 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 EVX1P49640 407 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 PRMT2P55345 433 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 HSD17B7P56937 341 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 PGGHGQ32M88 737 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 ARL9Q6T311 187 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 RD3Q7Z3Z2 195 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 GDF7Q7Z4P5 450 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 HDDC3Q8N4P3 179 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 TTLQ8NG68 377 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 OR2L5Q8NG80 312 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 OR10H4Q8NGA5 316 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 OR4E2Q8NGC2 313 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 ZCCHC10Q8TBK6 192 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 SPPL3Q8TCT6 385 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 ACOT11Q8WXI4 607 aaPredicted RBP12.06□□□□□ -0.48
SHC1-210ENST00000448116 HERVK_113Q902F9 699 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 SLC35A4Q96G79 324 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 COQ7Q99807 217 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 DPH1Q9BZG8 443 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 OR51V1Q9H2C8 321 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 RBFOX1Q9NWB1 397 aaKnown RBP12.06□□□□□ -0.48
SHC1-210ENST00000448116 SERGEFQ9UGK8 458 aa12.06□□□□□ -0.48
SHC1-210ENST00000448116 APOBEC3BQ9UH17 382 aaKnown RBP12.06□□□□□ -0.48
SHC1-210ENST00000448116 CDC42EP2O14613 210 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 EFCAB14O75071 495 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 MRPL3P09001 348 aaKnown RBP12.05□□□□□ -0.48
SHC1-210ENST00000448116 GKN3PP0CG01 181 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 FGF9P31371 208 aaPredicted RBP12.05□□□□□ -0.48
SHC1-210ENST00000448116 ZNF155Q12901 538 aaPredicted RBP12.05□□□□□ -0.48
SHC1-210ENST00000448116 IRF4Q15306 451 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 FAM78AQ5JUQ0 283 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 AADACL4Q5VUY2 407 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 FCRLBQ6BAA4 426 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 SLC48A1Q6P1K1 146 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 PSRC1Q6PGN9 363 aaPredicted RBP12.05□□□□□ -0.48
SHC1-210ENST00000448116 CXXC5Q7LFL8 322 aaKnown RBP12.05□□□□□ -0.48
SHC1-210ENST00000448116 GHDCQ8N2G8 530 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 SMAP2Q8WU79 429 aaPredicted RBP12.05□□□□□ -0.48
SHC1-210ENST00000448116 SYNPO2LQ9H987 977 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 GALNT9Q9HCQ5 603 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 MRPS18AQ9NVS2 196 aaKnown RBP12.05□□□□□ -0.48
SHC1-210ENST00000448116 CHST2Q9Y4C5 530 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 MAU2Q9Y6X3 613 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 KIAA1671Q9BY89 1806 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 A0A0G2JMP0 313 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 A0A0X1KG70 313 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 CENPBD1B2RD01 187 aa12.05□□□□□ -0.48
SHC1-210ENST00000448116 CHST10O43529 356 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms