RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 NR4A3Q92570 626 aa17.15■□□□□ 0.34
PCDHA1-202ENST00000394633 OSTF1Q92882 214 aa17.15■□□□□ 0.34
PCDHA1-202ENST00000394633 NECTIN4Q96NY8 510 aa17.15■□□□□ 0.34
PCDHA1-202ENST00000394633 FERD3LQ96RJ6 166 aa17.15■□□□□ 0.34
PCDHA1-202ENST00000394633 NIPAL2Q9H841 368 aa17.15■□□□□ 0.34
PCDHA1-202ENST00000394633 EQTNQ9NQ60 294 aa17.15■□□□□ 0.34
PCDHA1-202ENST00000394633 ASB6Q9NWX5 421 aa17.15■□□□□ 0.34
PCDHA1-202ENST00000394633 IL20Q9NYY1 176 aa17.15■□□□□ 0.34
PCDHA1-202ENST00000394633 SLC13A4Q9UKG4 626 aa17.15■□□□□ 0.34
PCDHA1-202ENST00000394633 CBLCQ9ULV8 474 aa17.15■□□□□ 0.34
PCDHA1-202ENST00000394633 F5P12259 2224 aa17.14■□□□□ 0.34
PCDHA1-202ENST00000394633 SOCS6O14544 535 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 ERI3O43414 337 aaKnown RBP17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 CHST10O43529 356 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 PIP5K1CO60331 668 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 SLC43A1O75387 559 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 AIFM1O95831 613 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 THY1P04216 161 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 FPR3P25089 353 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 STAT5AP42229 794 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 IL12RB1P42701 662 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 MLF2Q15773 248 aaPredicted RBP17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 PGGHGQ32M88 737 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 TMEM35AQ53FP2 167 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 MRM1Q6IN84 353 aaKnown RBP17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 PLCZ1Q86YW0 608 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 KLBQ86Z14 1044 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 MS4A6EQ96DS6 147 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 SECISBP2Q96T21 854 aaKnown RBP17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 PRDM7Q9NQW5 492 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 IL20RAQ9UHF4 553 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 CSNK1G3Q9Y6M4 447 aa17.14■□□□□ 0.33
PCDHA1-202ENST00000394633 ISM1B1AKI9 464 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 TNFRSF10AO00220 468 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 ZIC2O95409 532 aaPredicted RBP17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 CHRNB1P11230 501 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 HIST1H1TP22492 207 aaPredicted RBP17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 HTR1FP30939 366 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 P2RY2P41231 377 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 RRAS2P62070 204 aaPredicted RBP17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 ZNF322Q6U7Q0 402 aaPredicted RBP17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 B3GLCTQ6Y288 498 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 NR2C2APQ86WQ0 139 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 GJD3Q8N144 294 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 ACOT4Q8N9L9 421 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 ACOT11Q8WXI4 607 aaPredicted RBP17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 MOAP1Q96BY2 351 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 ANKRD19PQ9H560 264 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 CES1P1Q9UKY3 287 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 ENTPD4Q9Y227 616 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 EMC8O43402 210 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 KLF4O43474 513 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 NFATC1O95644 943 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 LAMP2P13473 410 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 ARSBP15848 533 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 ELK1P19419 428 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 CFL1P23528 166 aaKnown RBP17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 ATP5A1P25705 553 aaKnown RBP17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 HTR2BP41595 481 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 MC3RP41968 323 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 AGFG1P52594 562 aaKnown RBP17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 TGM3Q08188 693 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 ZNF234Q14588 700 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 DECR1Q16698 335 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 TMEM44Q2T9K0 475 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 C6orf132Q5T0Z8 1188 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 LYPD8Q6UX82 237 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 ZNF620Q6ZNG0 422 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 NRMQ8IXM6 262 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 SIRT6Q8N6T7 355 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 NUP43Q8NFH3 380 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 INSM2Q96T92 566 aaPredicted RBP17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 WACQ9BTA9 647 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 TRIM45Q9H8W5 580 aaPredicted RBP17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 GALNT9Q9HCQ5 603 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 HINT3Q9NQE9 182 aaKnown RBP17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 MCUBQ9NWR8 336 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 ADAM30Q9UKF2 790 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 CDH10Q9Y6N8 788 aa17.13■□□□□ 0.33
PCDHA1-202ENST00000394633 A0A0X1KG70 313 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 SMLR1H3BR10 107 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 AKR7A2O43488 359 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 ORC5O43913 435 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 PLOD3O60568 738 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 SLC19A2O60779 497 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 IGFBP4P22692 258 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 INPP1P49441 399 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 PRR5P85299 388 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 BTBD16Q32M84 506 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 ABHD17CQ6PCB6 329 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 PLEKHM3Q6ZWE6 761 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 GDF7Q7Z4P5 450 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 TTLQ8NG68 377 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 C12orf66Q96MD2 445 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 GFM1Q96RP9 751 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 SYNDIG1Q9H7V2 258 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 ISG20L2Q9H9L3 353 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 ZDHHC4Q9NPG8 344 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 MED17Q9NVC6 651 aa17.12■□□□□ 0.33
PCDHA1-202ENST00000394633 F3P13726 295 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms