RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 SNAP47Q5SQN1 464 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 FRRS1Q6ZNA5 592 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 CPOQ8IVL8 374 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 SRFBP1Q8NEF9 429 aaKnown RBP17.59■□□□□ 0.41
CBX1-202ENST00000393408 SAMD8Q96LT4 415 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 C6orf106Q9H6K1 298 aaPredicted RBP17.59■□□□□ 0.41
CBX1-202ENST00000393408 TRIM45Q9H8W5 580 aaPredicted RBP17.59■□□□□ 0.41
CBX1-202ENST00000393408 SPHK1Q9NYA1 384 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 THAP10Q9P2Z0 257 aaPredicted RBP17.59■□□□□ 0.41
CBX1-202ENST00000393408 NLKQ9UBE8 527 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 ZNF780BQ9Y6R6 833 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 DVL2O14641 736 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 HMGN1P05114 100 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 NDUFV2P19404 249 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 MFSD9Q8NBP5 474 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 ADAMTS15Q8TE58 950 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 GANCQ8TET4 914 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 UPRTQ96BW1 309 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 MARVELD1Q9BSK0 173 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 IL23AQ9NPF7 189 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 NLGN3Q9NZ94 848 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 ADAM30Q9UKF2 790 aa17.59■□□□□ 0.41
CBX1-202ENST00000393408 ZNF443Q9Y2A4 671 aaPredicted RBP17.59■□□□□ 0.41
CBX1-202ENST00000393408 SLC19A2O60779 497 aa17.58■□□□□ 0.41
CBX1-202ENST00000393408 ERP29P30040 261 aaKnown RBP17.58■□□□□ 0.41
CBX1-202ENST00000393408 CTBP2P56545 445 aa17.58■□□□□ 0.41
CBX1-202ENST00000393408 FGL2Q14314 439 aa17.58■□□□□ 0.41
CBX1-202ENST00000393408 FAM214AQ32MH5 1076 aa17.58■□□□□ 0.41
CBX1-202ENST00000393408 PUS10Q3MIT2 529 aaKnown RBP17.58■□□□□ 0.41
CBX1-202ENST00000393408 FAM111BQ6SJ93 734 aa17.58■□□□□ 0.41
CBX1-202ENST00000393408 CXXC5Q7LFL8 322 aaKnown RBP17.58■□□□□ 0.41
CBX1-202ENST00000393408 NANOGNBQ7Z5D8 188 aa17.58■□□□□ 0.41
CBX1-202ENST00000393408 NRROSQ86YC3 692 aa17.58■□□□□ 0.41
CBX1-202ENST00000393408 SLC16A11Q8NCK7 471 aa17.58■□□□□ 0.41
CBX1-202ENST00000393408 ZFAND1Q8TCF1 268 aa17.58■□□□□ 0.41
CBX1-202ENST00000393408 ISG20L2Q9H9L3 353 aaKnown RBP17.58■□□□□ 0.41
CBX1-202ENST00000393408 PHPT1Q9NRX4 125 aaPredicted RBP17.58■□□□□ 0.41
CBX1-202ENST00000393408 H2AFY2Q9P0M6 372 aaPredicted RBP17.58■□□□□ 0.41
CBX1-202ENST00000393408 GSAPA4D1B5 854 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 PRR19A6NJB7 356 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 FAM183AA6NL82 134 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 GTPBP1O00178 669 aaKnown RBP17.58■□□□□ 0.4
CBX1-202ENST00000393408 TEAD1P28347 426 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 GCGRP47871 477 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 GALK2Q01415 458 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 BDH1Q02338 343 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 FAPQ12884 760 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 LRRC32Q14392 662 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 MFSD12Q6NUT3 480 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 TOR1AIP2Q8NFQ8 470 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 GRPEL2Q8TAA5 225 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 OTULINQ96BN8 352 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 UBQLN3Q9H347 655 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 LYARQ9NX58 379 aaKnown RBP17.58■□□□□ 0.4
CBX1-202ENST00000393408 CXXC1Q9P0U4 656 aaPredicted RBP17.58■□□□□ 0.4
CBX1-202ENST00000393408 SLC7A7Q9UM01 511 aa17.58■□□□□ 0.4
CBX1-202ENST00000393408 RNF13O43567 381 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 RGS9O75916 674 aaPredicted RBP17.57■□□□□ 0.4
CBX1-202ENST00000393408 ALX3O95076 343 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 ASGR2P07307 311 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 RNF144AP50876 292 aaPredicted RBP17.57■□□□□ 0.4
CBX1-202ENST00000393408 NR2C2APQ86WQ0 139 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 OR7G2Q8NG99 324 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 OR51G2Q8NGK0 314 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 SP7Q8TDD2 431 aaPredicted RBP17.57■□□□□ 0.4
CBX1-202ENST00000393408 CDS1Q92903 461 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 SERGEFQ9UGK8 458 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 DUXAA6NLW8 204 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 SLC43A1O75387 559 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 PAK4O96013 591 aaPredicted RBP17.57■□□□□ 0.4
CBX1-202ENST00000393408 ZGLP1P0C6A0 271 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 PRKCAP17252 672 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 ELK1P19419 428 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 PTNP21246 168 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 GZMKP49863 264 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 ZNF425Q6IV72 752 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 SMARCD3Q6STE5 483 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 B3GLCTQ6Y288 498 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 ZNF836Q6ZNA1 936 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 SPRED2Q7Z698 418 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 ACOT12Q8WYK0 555 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 C10orf90Q96M02 699 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 ASB16Q96NS5 453 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 FCRL4Q96PJ5 515 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 TIMP4Q99727 224 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 GON7Q9BXV9 100 aa17.57■□□□□ 0.4
CBX1-202ENST00000393408 MTHFD2LQ9H903 347 aaPredicted RBP17.57■□□□□ 0.4
CBX1-202ENST00000393408 RPRD1BQ9NQG5 326 aaKnown RBP17.57■□□□□ 0.4
CBX1-202ENST00000393408 SIRT4Q9Y6E7 314 aaPredicted RBP17.57■□□□□ 0.4
CBX1-202ENST00000393408 CEACAM5P06731 702 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 STXBP1P61764 594 aaKnown RBP17.56■□□□□ 0.4
CBX1-202ENST00000393408 BTN3A2P78410 334 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 ADAM15Q13444 863 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 CDC73Q6P1J9 531 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 SYCE2Q6PIF2 218 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 LSRQ86X29 649 aaPredicted RBP17.56■□□□□ 0.4
CBX1-202ENST00000393408 GID4Q8IVV7 300 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 MS4A4EQ96PG1 132 aa17.56■□□□□ 0.4
CBX1-202ENST00000393408 UBL7Q96S82 380 aaPredicted RBP17.56■□□□□ 0.4
CBX1-202ENST00000393408 NIPAL2Q9H841 368 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms