RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ERP44Q9BS26 406 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 ALG12Q9BV10 488 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 HCAR1Q9BXC0 346 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 ZNF581Q9P0T4 197 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 DHRS4-AS1Q9P1J3 65 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 GPR89AB7ZAQ6 455 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 XPO1O14980 1071 aaKnown RBP4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 CTAGE5O15320 804 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 PHF1O43189 567 aaPredicted RBP4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 TPST2O60704 377 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 HBQ1P09105 142 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 ALPIP09923 528 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 GPR89BP0CG08 455 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 CT45A10P0DMU9 189 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 CLUP10909 449 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 USP6P35125 1406 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 MAGEA9P43362 315 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 NOVA1P51513 510 aaKnown RBP4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 IST1P53990 364 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 PEX6Q13608 980 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 LRRC23Q53EV4 343 aaPredicted RBP4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 TEX44Q53QW1 395 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 CELF3Q5SZQ8 465 aaKnown RBP4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 CES3Q6UWW8 571 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 UNC5CLQ8IV45 518 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 AGAP11Q8TF27 550 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 FAM222BQ8WU58 562 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 SPRYD4Q8WW59 207 aaPredicted RBP4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 C18orf25Q96B23 403 aaPredicted RBP4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 SENP8Q96LD8 212 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 POLR1EQ9GZS1 481 aaKnown RBP4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 CALHM2Q9HA72 323 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 CLEC5AQ9NY25 188 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 WDR45Q9Y484 360 aa4.25□□□□□ -1.73
RNU6-40P-201ENST00000384254 ZNF840PA6NDX5 716 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 OR6C65A6NJZ3 312 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 CCT8L1PA6NM43 557 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 K7EQM0 130 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 STX7O15400 261 aaKnown RBP4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 GPRIN2O60269 458 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 SRPX2O60687 465 aaPredicted RBP4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 BCAS1O75363 584 aaPredicted RBP4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 ADCY5O95622 1261 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 IDSP22304 550 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 PTGER3P43115 390 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 PJVKQ0ZLH3 352 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 COX10Q12887 443 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 LTB4RQ15722 352 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 TBC1D21Q8IYX1 336 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 FBXO30Q8TB52 745 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 CNIH3Q8TBE1 160 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 RLN3Q8WXF3 142 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 CTNNBL1Q8WYA6 563 aaPredicted RBP4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 OR5M11Q96RB7 305 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 ZNF607Q96SK3 696 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 TEX13BQ9BXU2 312 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 CRNKL1Q9BZJ0 848 aaKnown RBP4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 ELOVL4Q9GZR5 314 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 GLT8D2Q9H1C3 349 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 OPN3Q9H1Y3 402 aaPredicted RBP4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 MEPEQ9NQ76 525 aaPredicted RBP4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 EHFQ9NZC4 300 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 C6orf203Q9P0P8 240 aaPredicted RBP4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 RNF14Q9UBS8 474 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 SLC2A6Q9UGQ3 507 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 RSPH14Q9UHP6 348 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 DUSP12Q9UNI6 340 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 SMC3Q9UQE7 1217 aa4.24□□□□□ -1.73
RNU6-40P-201ENST00000384254 GON4LQ3T8J9 2241 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 SNED1Q8TER0 1413 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 ZSCAN5BA6NJL1 495 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 SAP18O00422 153 aaKnown RBP4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 MPHOSPH10O00566 681 aaKnown RBP4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 ZNF253O75346 499 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 TM7SF2O76062 418 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 GJB5O95377 273 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 TBX6O95947 436 aaPredicted RBP4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 IGHG3P01860 377 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 OPN1LWP04000 364 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 FOLR2P14207 255 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 XRCC1P18887 633 aaPredicted RBP4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 NF2P35240 595 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 OR1D4P47884 311 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 ALDH3B2P48448 385 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 CBX1P83916 185 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 RABGAP1LQ5R372 815 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 APTXQ7Z2E3 356 aaKnown RBP4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 OR2T34Q8NGX1 318 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 RHOXF1Q8NHV9 184 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 NANPQ8TBE9 248 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 PPP1R16AQ96I34 528 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 CASD1Q96PB1 797 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 TMEM121Q9BTD3 319 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 DUSP16Q9BY84 665 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 RHOJQ9H4E5 214 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 AIPL1Q9NZN9 384 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 DPM3Q9P2X0 92 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 ANAPC7Q9UJX3 599 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 GSTK1Q9Y2Q3 226 aa4.23□□□□□ -1.73
RNU6-40P-201ENST00000384254 A8MX80 341 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms