RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 IKBIPQ70UQ0 350 aa16.06■□□□□ 0.16
RPUSD3-201ENST00000383820 OR5M1Q8NGP8 315 aa16.06■□□□□ 0.16
RPUSD3-201ENST00000383820 OR6K3Q8NGY3 331 aa16.06■□□□□ 0.16
RPUSD3-201ENST00000383820 ACMSDQ8TDX5 336 aa16.06■□□□□ 0.16
RPUSD3-201ENST00000383820 IGFBPL1Q8WX77 278 aa16.06■□□□□ 0.16
RPUSD3-201ENST00000383820 ZC3HAV1LQ96H79 300 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-201ENST00000383820 AMDHD1Q96NU7 426 aa16.06■□□□□ 0.16
RPUSD3-201ENST00000383820 KCNA7Q96RP8 456 aa16.06■□□□□ 0.16
RPUSD3-201ENST00000383820 KLHL4Q9C0H6 718 aa16.06■□□□□ 0.16
RPUSD3-201ENST00000383820 FANCFQ9NPI8 374 aa16.06■□□□□ 0.16
RPUSD3-201ENST00000383820 AQP8O94778 261 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 KCNH1O95259 989 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 UTS2O95399 124 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 ANGPTL1O95841 491 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 GSTA1P08263 222 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 GCAP28676 217 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 IMPG1Q17R60 797 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 GLE1Q53GS7 698 aaKnown RBP16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 C22orf34Q6ZV56 151 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 TRIM46Q7Z4K8 759 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 GGNQ86UU5 652 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 CDC26Q8NHZ8 85 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 CCDC126Q96EE4 140 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 GMPPAQ96IJ6 420 aaPredicted RBP16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 METTL2AQ96IZ6 378 aaKnown RBP16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 PRRG4Q9BZD6 226 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 GSTO2Q9H4Y5 243 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 MID1IP1Q9NPA3 183 aa16.05■□□□□ 0.16
RPUSD3-201ENST00000383820 HEATR5AQ86XA9 2040 aa16.04■□□□□ 0.16
RPUSD3-201ENST00000383820 A0A087WZY1 265 aa16.04■□□□□ 0.16
RPUSD3-201ENST00000383820 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.04■□□□□ 0.16
RPUSD3-201ENST00000383820 KLF4O43474 513 aa16.04■□□□□ 0.16
RPUSD3-201ENST00000383820 RSL1D1O76021 490 aaKnown RBP16.04■□□□□ 0.16
RPUSD3-201ENST00000383820 URI1O94763 535 aaPredicted RBP16.04■□□□□ 0.16
RPUSD3-201ENST00000383820 PTH2RP49190 550 aa16.04■□□□□ 0.16
RPUSD3-201ENST00000383820 NR1H2P55055 460 aa16.04■□□□□ 0.16
RPUSD3-201ENST00000383820 SH2D5Q6ZV89 423 aa16.04■□□□□ 0.16
RPUSD3-201ENST00000383820 PRIMA1Q86XR5 153 aa16.04■□□□□ 0.16
RPUSD3-201ENST00000383820 HOXB13Q92826 284 aaPredicted RBP16.04■□□□□ 0.16
RPUSD3-201ENST00000383820 OR10A4Q9H209 315 aa16.04■□□□□ 0.16
RPUSD3-201ENST00000383820 GLRX2Q9NS18 164 aa16.04■□□□□ 0.16
RPUSD3-201ENST00000383820 UQCRHLA0A096LP55 91 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 TRIM64A6NGJ6 449 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 TRIM64BA6NI03 449 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 ALG1L2C9J202 215 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 EIF1AYO14602 144 aaKnown RBP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 SMAD7O15105 426 aaKnown RBP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 SS18L1O75177 396 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 PLGP00747 810 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 THBDP07204 575 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 NGFRP08138 427 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 GABRA3P34903 492 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 MAP3K8P41279 467 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 EIF1AXP47813 144 aaKnown RBP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 RFX3P48380 749 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 FOXA1P55317 472 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 CTBP2P56545 445 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 PPP2R2BQ00005 443 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 EXOC3L2Q2M3D2 409 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 GRAMD1BQ3KR37 738 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 VPS26BQ4G0F5 336 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 ANKRD34AQ69YU3 496 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 APOOLQ6UXV4 268 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 STAC2Q6ZMT1 411 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 WDR75Q8IWA0 830 aaKnown RBP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 GTPBP8Q8N3Z3 284 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 NOA1Q8NC60 698 aaKnown RBP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 MNS1Q8NEH6 495 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 TMEM171Q8WVE6 324 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 ZNF764Q96H86 408 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 RRAGDQ9NQL2 400 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 ZNF701Q9NV72 531 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 DCDC2Q9UHG0 476 aa16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 MCTS1Q9ULC4 181 aaKnown RBP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 POLR3HQ9Y535 204 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-201ENST00000383820 HIVEP2P31629 2446 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 C7orf72A4D263 438 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 UBFD1O14562 309 aaKnown RBP16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 NKX2-2O95096 273 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 CNOT4O95628 575 aaKnown RBP16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 PRPS2P11908 318 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 PCSK6P29122 969 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 SLC6A8P48029 635 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 SLC29A2Q14542 456 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 NOXRED1Q6NXP6 359 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 ZNF704Q6ZNC4 412 aaPredicted RBP16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 BEND4Q6ZU67 534 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 TRMT10CQ7L0Y3 403 aaKnown RBP16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 CCNYL1Q8N7R7 359 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 OR10D3Q8NH80 312 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 CEP70Q8NHQ1 597 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 ZBTB8AQ96BR9 441 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 ADGRG7Q96K78 797 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 IQCGQ9H095 443 aaKnown RBP16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 CXorf56Q9H5V9 222 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 VDAC3Q9Y277 283 aa16.02■□□□□ 0.16
RPUSD3-201ENST00000383820 JMJD1CQ15652 2540 aa16.01■□□□□ 0.15
RPUSD3-201ENST00000383820 GXYLT2A0PJZ3 443 aa16.01■□□□□ 0.15
RPUSD3-201ENST00000383820 NPIPB8E9PQR5 432 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms