RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 PBX3P40426 434 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 CHRNA4P43681 627 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 MRPL19P49406 292 aaKnown RBP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 SFRP5Q5T4F7 317 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 ANKRD34AQ69YU3 496 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 ZC3H14Q6PJT7 736 aaKnown RBP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 LRRC28Q86X40 367 aaPredicted RBP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 OR4K2Q8NGD2 314 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 GPR21Q99679 349 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 TMEM106CQ9BVX2 250 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 SLC39A8Q9C0K1 460 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 SLC6A16Q9GZN6 736 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 OSBPL2Q9H1P3 480 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 TCEAL2Q9H3H9 227 aaPredicted RBP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 RRAGCQ9HB90 399 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 TVP23BQ9NYZ1 205 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 MRPL15Q9P015 296 aaKnown RBP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 ESR1P03372 595 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 TPT1P13693 172 aaKnown RBP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 BMP7P18075 431 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 HRH2P25021 359 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 MC4RP32245 332 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 ACTA2P62736 377 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 ACTG2P63267 376 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 ACTC1P68032 377 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 ACTA1P68133 377 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 CAMK2DQ13557 499 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 GLT8D1Q68CQ7 371 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 FIGNL1Q6PIW4 674 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 FUNDC1Q8IVP5 155 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 CHFRQ96EP1 664 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 ATG101Q9BSB4 218 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 C2orf88Q9BSF0 95 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 TSSK6Q9BXA6 273 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 BHLHE41Q9C0J9 482 aaPredicted RBP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 EIF5A2Q9GZV4 153 aaKnown RBP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 MRPS30Q9NP92 439 aaKnown RBP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 TAS2R16Q9NYV7 291 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 TRPC4Q9UBN4 977 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 EXO1Q9UQ84 846 aaKnown RBP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 NAP1L6A6NFF2 107 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 TMEM189-UBE2V1I3L0A0 370 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 CCL22O00626 93 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 USP2O75604 605 aaPredicted RBP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 RAB36O95755 333 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 RHOP08100 348 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 SYPP08247 313 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 COX7A2P14406 83 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 DAPP51397 102 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 ABHD18Q0P651 414 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 TUSC3Q13454 348 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 OLIG2Q13516 323 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 NDUFA9Q16795 377 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 CPZQ66K79 652 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 KIAA1161Q6NSJ0 714 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 TTLL10Q6ZVT0 673 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 OR11H7Q8NGC8 314 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 OR10R2Q8NGX6 335 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 OIT3Q8WWZ8 545 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 NT5C3BQ969T7 300 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 C14orf144Q96I85 54 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 PANX1Q96RD7 426 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 IMP3Q9NV31 184 aaKnown RBP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 AIG1Q9NVV5 245 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 CCDC163A0A0D9SF12 145 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 NPEPPSL1A6NEC2 478 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 I6L893 689 aaPredicted RBP11.11□□□□□ -0.63
NPHP4-202ENST00000378161 LDLRAD4O15165 306 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 RBBP9O75884 186 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 DCNP07585 359 aaKnown RBP11.11□□□□□ -0.63
NPHP4-202ENST00000378161 SLC35G4P0C7Q5 338 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 CELP19835 753 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 CXCL3P19876 107 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 OC90Q02509 493 aaPredicted RBP11.11□□□□□ -0.63
NPHP4-202ENST00000378161 IRF8Q02556 426 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 MLLT11Q13015 90 aaPredicted RBP11.11□□□□□ -0.63
NPHP4-202ENST00000378161 SERTAD2Q14140 314 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 GUK1Q16774 197 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 RIPPLY2Q5TAB7 128 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 HIST2H3AQ71DI3 136 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 C1orf216Q8TAB5 229 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 HSH2DQ96JZ2 352 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 KCNH6Q9H252 994 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 AKR7A3O95154 331 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 PRH1P02810 166 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 GABRA1P14867 456 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 PSMB1P20618 241 aaKnown RBP11.11□□□□□ -0.63
NPHP4-202ENST00000378161 DLSTP36957 453 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 VAMP2P63027 116 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 CDK6Q00534 326 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 IRF3Q14653 427 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 TMEM71Q6P5X7 295 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 ZNF845Q96IR2 970 aaPredicted RBP11.11□□□□□ -0.63
NPHP4-202ENST00000378161 SLC2A13Q96QE2 648 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 FEVQ99581 238 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 JAM3Q9BX67 310 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 TMEM231Q9H6L2 316 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 OR2S2Q9NQN1 319 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 TMPRSS4Q9NRS4 437 aa11.11□□□□□ -0.63
NPHP4-202ENST00000378161 KPTNQ9Y664 436 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms