RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 COPB2P35606 906 aa2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 RPL4P36578 427 aaKnown RBP2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 MRPS11P82912 194 aaKnown RBP2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 MYBPC1Q00872 1141 aa2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 OTUD4Q01804 1114 aaKnown RBP2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 TLE4Q04727 773 aa2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 PKN2Q16513 984 aaKnown RBP2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 STAC2Q6ZMT1 411 aa2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 ZNF589Q86UQ0 364 aaPredicted RBP2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 OR2T33Q8NG76 320 aa2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 OR2A12Q8NGT7 310 aa2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 TMEM80Q96HE8 168 aa2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 DNPEPQ9ULA0 475 aa2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 RPGRIP1LQ68CZ1 1315 aa2.82□□□□□ -1.96
RNU4-28P-201ENST00000364739 MYO10Q9HD67 2058 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 FBLL1A6NHQ2 334 aaKnown RBP2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 C19orf81C9J6K1 198 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 K7ENP7 123 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 RAMP1O60894 148 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 TBL1XO60907 577 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 GPX5O75715 221 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 SUPT7LO94864 414 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 CD55P08174 381 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 GABRR1P24046 479 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 NOVA1P51513 510 aaKnown RBP2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 EGFEM1PQ0D2K5 195 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 WDR88Q6ZMY6 472 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 TMEM26Q6ZUK4 368 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 C1orf186Q6ZWK4 172 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 CYS1Q717R9 158 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 ALLCQ8N6M5 410 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 FBXO30Q8TB52 745 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 URGCPQ8TCY9 931 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 MCHR2Q969V1 340 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 FTHL17Q9BXU8 183 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 FANCFQ9NPI8 374 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 UTP6Q9NYH9 597 aaKnown RBP2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 OR1A1Q9P1Q5 309 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 SPRR3Q9UBC9 169 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 TRIM10Q9UDY6 481 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 FETUBQ9UGM5 382 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 BCAP29Q9UHQ4 241 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 THSD7BQ9C0I4 1608 aa2.81□□□□□ -1.96
RNU4-28P-201ENST00000364739 TRBV2A0A0J9YWF9 115 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 RSPH10B2B2RC85 870 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 ALOX15BO15296 676 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 KERAO60938 352 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 CABYRO75952 493 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 STSP08842 583 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 RSPH10BP0C881 870 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 GSTT2P0CG29 244 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 GSTT2BP0CG30 244 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 PRDX2P32119 198 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 RPL29P47914 159 aaKnown RBP2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 DHPSP49366 369 aaPredicted RBP2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 RPL8P62917 257 aaKnown RBP2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 ARF5P84085 180 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 VLDLRP98155 873 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 DAZ2Q13117 558 aaKnown RBP2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 TFDP1Q14186 410 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 CYBRD1Q53TN4 286 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 IL23RQ5VWK5 629 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 SULT1C3Q6IMI6 304 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 FAM159AQ6UWV7 190 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 PAQR9Q6ZVX9 377 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 ZNF100Q8IYN0 542 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 LINC01555Q8NAE3 123 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 OR9A4Q8NGU2 314 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 ANKRD49Q8WVL7 239 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 EEF2KMTQ96G04 330 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 TMEM121Q9BTD3 319 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 CAB39LQ9H9S4 337 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 DAZ3Q9NR90 486 aaKnown RBP2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 MARCH5Q9NX47 278 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 ANKMY1Q9P2S6 941 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 NUDCQ9Y266 331 aa2.8□□□□□ -1.96
RNU4-28P-201ENST00000364739 A0A0J9YXY3 114 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 SYCE3A1L190 88 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 OLFM2O95897 454 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 TOP1P11387 765 aaKnown RBP2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 XRCC1P18887 633 aaPredicted RBP2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 CD1BP29016 333 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 OC90Q02509 493 aaPredicted RBP2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 LRRC63Q05C16 580 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 AANATQ16613 207 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 LRRC36Q1X8D7 754 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 CCDC71LQ8N9Z2 235 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 SPC24Q8NBT2 197 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 TRUB1Q8WWH5 349 aaKnown RBP2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 SRSF12Q8WXF0 261 aaKnown RBP2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 FGGYQ96C11 551 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 ELMO2Q96JJ3 720 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 PAK1IP1Q9NWT1 392 aaPredicted RBP2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 CD274Q9NZQ7 290 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 IL20RAQ9UHF4 553 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 APPL1Q9UKG1 709 aa2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 PRG3Q9Y2Y8 225 aaPredicted RBP2.79□□□□□ -1.96
RNU4-28P-201ENST00000364739 DFNA5O60443 496 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 PNPP00491 289 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms