RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 MCUBQ9NWR8 336 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 APOBEC3BQ9UH17 382 aaKnown RBP11.51□□□□□ -0.57
VPS33B-201ENST00000333371 FAM25AB3EWG3 89 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 FAM25CB3EWG5 89 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 FAM25GB3EWG6 89 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 CACNB4O00305 520 aaPredicted RBP11.5□□□□□ -0.57
VPS33B-201ENST00000333371 PLOD3O60568 738 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 RPN2P04844 631 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 FAM157BP0CG42 384 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 CHRNB1P11230 501 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 AGERQ15109 404 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 CCDC58Q4VC31 144 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 CCNJQ5T5M9 372 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 IDNKQ5T6J7 187 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 ZNF57Q68EA5 555 aaPredicted RBP11.5□□□□□ -0.57
VPS33B-201ENST00000333371 ADAMTSL4Q6UY14 1074 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 RASSF6Q6ZTQ3 369 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 ASB18Q6ZVZ8 466 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 C16orf62Q7Z3J2 963 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 BMPERQ8N8U9 685 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 POGLUT1Q8NBL1 392 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 KCT2Q8NC54 265 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 PIGXQ8TBF5 258 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 SLC35A4Q96G79 324 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 MCHR1Q99705 422 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 HCAR1Q9BXC0 346 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 TRIM45Q9H8W5 580 aaPredicted RBP11.5□□□□□ -0.57
VPS33B-201ENST00000333371 MRPS30Q9NP92 439 aaKnown RBP11.5□□□□□ -0.57
VPS33B-201ENST00000333371 RBFOX1Q9NWB1 397 aaKnown RBP11.5□□□□□ -0.57
VPS33B-201ENST00000333371 ADAM29Q9UKF5 820 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 CBLCQ9ULV8 474 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 ENTPD4Q9Y227 616 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 ATG2AQ2TAZ0 1938 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 ARHGEF17Q96PE2 2063 aaPredicted RBP11.5□□□□□ -0.57
VPS33B-201ENST00000333371 F5P12259 2224 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 CASC3O15234 703 aaKnown RBP11.5□□□□□ -0.57
VPS33B-201ENST00000333371 MID1O15344 667 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 PAHP00439 452 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 TRAPPC2P0DI81 140 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 TRAPPC2BP0DI82 140 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 EVI2BP34910 448 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 DRD3P35462 400 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 KRT33BQ14525 404 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 FCRLBQ6BAA4 426 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 PLBD1Q6P4A8 553 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 VITQ6UXI7 678 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 GDF7Q7Z4P5 450 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 CDS1Q92903 461 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 ELP4Q96EB1 424 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 ARHGDIGQ99819 225 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 PCBD2Q9H0N5 130 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 PRSS16Q9NQE7 514 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 CES1P1Q9UKY3 287 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 ZFR2Q9UPR6 939 aaKnown RBP11.5□□□□□ -0.57
VPS33B-201ENST00000333371 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.5□□□□□ -0.57
VPS33B-201ENST00000333371 GTPBP1O00178 669 aaKnown RBP11.5□□□□□ -0.57
VPS33B-201ENST00000333371 DNAJB6O75190 326 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 TFPIP10646 304 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 F3P13726 295 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 PRG2P13727 222 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 CPN2P22792 545 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 PEBP1P30086 187 aaKnown RBP11.5□□□□□ -0.57
VPS33B-201ENST00000333371 RAB28P51157 221 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 ST3GAL3Q11203 375 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 FAPQ12884 760 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 RUNX3Q13761 415 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 FGL2Q14314 439 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 PGGHGQ32M88 737 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 LINC00471Q8N535 108 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 TMEM99Q8N816 258 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 OR52E1Q8NGJ3 308 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 TMEM43Q9BTV4 400 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 ACOXLQ9NUZ1 547 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 OBP2AQ9NY56 170 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 SLC7A7Q9UM01 511 aa11.5□□□□□ -0.57
VPS33B-201ENST00000333371 YBX2Q9Y2T7 364 aaKnown RBP11.5□□□□□ -0.57
VPS33B-201ENST00000333371 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 NPIPA5A0A0B4J1W7 369 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 SNTNA6NMZ2 147 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 NPIPA7E9PJI5 369 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 REM1O75628 298 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 KAT7O95251 611 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 GKN3PP0CG01 181 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 NPIPA8P0DM63 369 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 CSNK2A2P19784 350 aaPredicted RBP11.49□□□□□ -0.57
VPS33B-201ENST00000333371 GJA4P35212 333 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 HTR2BP41595 481 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 GCGRP47871 477 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 OR10A3P58181 314 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 ABATP80404 500 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 ZIC1Q15915 447 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 MRM1Q6IN84 353 aaKnown RBP11.49□□□□□ -0.57
VPS33B-201ENST00000333371 SLC48A1Q6P1K1 146 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 ZNF322Q6U7Q0 402 aaPredicted RBP11.49□□□□□ -0.57
VPS33B-201ENST00000333371 ZNF620Q6ZNG0 422 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 KLHL36Q8N4N3 616 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 GIMAP5Q96F15 307 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 SLC41A3Q96GZ6 507 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 TTTY10Q9BZA0 68 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 DPH1Q9BZG8 443 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms