RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CLDN6P56747 220 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 NHLH1Q02575 133 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 MVKQ03426 396 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 ELAVL1Q15717 326 aaKnown RBP11.85□□□□□ -0.51
DDX39A-202ENST00000324340 PRAMEF8Q5VWM4 474 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 PRAMEF7Q5VXH5 474 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 LCN10Q6JVE6 187 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 HEPHL1Q6MZM0 1159 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 REEP3Q6NUK4 255 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 USP43Q70EL4 1123 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 CBLL1Q75N03 491 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 SLC22A16Q86VW1 577 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 ASCC1Q8N9N2 400 aaKnown RBP11.85□□□□□ -0.51
DDX39A-202ENST00000324340 CDRT4Q8N9R6 151 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 OR5D16Q8NGK9 328 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 WDR36Q8NI36 951 aaKnown RBP11.85□□□□□ -0.51
DDX39A-202ENST00000324340 NFKBIDQ8NI38 313 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 SUN5Q8TC36 379 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 PTPMT1Q8WUK0 201 aaPredicted RBP11.85□□□□□ -0.51
DDX39A-202ENST00000324340 RAB8BQ92930 207 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 TSLPQ969D9 159 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 NCLNQ969V3 563 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 TP53INP1Q96A56 240 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 FBXL20Q96IG2 436 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 RNF145Q96MT1 663 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 PHOX2BQ99453 314 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 STACQ99469 402 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 SPSB2Q99619 263 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 ULBP3Q9BZM4 244 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 SPRY4Q9C004 299 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 B3GNT4Q9C0J1 378 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 ING2Q9H160 280 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 MMP27Q9H306 513 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 BCL2L10Q9HD36 194 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 ADAP2Q9NPF8 381 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 SACM1LQ9NTJ5 587 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 USE1Q9NZ43 259 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 BAG5Q9UL15 447 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 MKL2Q9ULH7 1088 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 SAMD4AQ9UPU9 718 aaKnown RBP11.85□□□□□ -0.51
DDX39A-202ENST00000324340 LIPT1Q9Y234 373 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 GRIP1Q9Y3R0 1128 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 B3GALT1Q9Y5Z6 326 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 FRYLO94915 3013 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 ZNF99A8MXY4 864 aaPredicted RBP11.84□□□□□ -0.51
DDX39A-202ENST00000324340 C17orf105B2RV13 164 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 SEC24DO94855 1032 aaPredicted RBP11.84□□□□□ -0.51
DDX39A-202ENST00000324340 DLGAP3O95886 979 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 CLPSP04118 112 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 IFNA16P05015 189 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 BCHEP06276 602 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 BMP4P12644 408 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 EEF1B2P24534 225 aaKnown RBP11.84□□□□□ -0.51
DDX39A-202ENST00000324340 ACVR2AP27037 513 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 UGT2B10P36537 528 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 POLR2IP36954 125 aaKnown RBP11.84□□□□□ -0.51
DDX39A-202ENST00000324340 EMDP50402 254 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 IFITM3Q01628 133 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 ZNF45Q02386 682 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 FUT5Q11128 374 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 AQP6Q13520 282 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 DAG1Q14118 895 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 GNA13Q14344 377 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 EXOSC7Q15024 291 aaKnown RBP11.84□□□□□ -0.51
DDX39A-202ENST00000324340 NSDHLQ15738 373 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 C6orf141Q5SZD1 244 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 ZNF544Q6NX49 715 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 FAM198BQ6UWH4 519 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 EIF3MQ7L2H7 374 aaKnown RBP11.84□□□□□ -0.51
DDX39A-202ENST00000324340 SLC16A11Q8NCK7 471 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 BPIFB6Q8NFQ5 453 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 OR52R1Q8NGF1 315 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 DYNC2LI1Q8TCX1 351 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 CAPSLQ8WWF8 208 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 XAGE5Q8WWM1 108 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 MARVELD3Q96A59 401 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 SLC35A4Q96G79 324 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 TMEM19Q96HH6 336 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 YIPF4Q9BSR8 244 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 LMF2Q9BU23 707 aaKnown RBP11.84□□□□□ -0.51
DDX39A-202ENST00000324340 UGT2B28Q9BY64 529 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 PIGUQ9H490 435 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 MAGIXQ9H6Y5 334 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 AKIRIN1Q9H9L7 192 aaPredicted RBP11.84□□□□□ -0.51
DDX39A-202ENST00000324340 DUSP22Q9NRW4 184 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 PISDQ9UG56 409 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 ZNF229Q9UJW7 825 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 RPS6KA6Q9UK32 745 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 NXT1Q9UKK6 140 aaKnown RBP11.84□□□□□ -0.51
DDX39A-202ENST00000324340 HSPE1-MOB4S4R3N1 261 aa11.84□□□□□ -0.51
DDX39A-202ENST00000324340 SPAARA0A1B0GVQ0 90 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 PMS2P1A4D2B8 440 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 TMEM229AB2RXF0 380 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 IDSB3KWA1 339 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 C9orf172C9J069 976 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 C5orf58C9J3I9 102 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 HRKO00198 91 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 PRAMEF2O60811 474 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 STK17BO94768 372 aa11.83□□□□□ -0.52
DDX39A-202ENST00000324340 PRKD3O94806 890 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms