RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 LRRTM3Q86VH5 581 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 MEX3DQ86XN8 651 aaKnown RBP9□□□□□ -0.97
NUDCD1-201ENST00000239690 FBXO22Q8NEZ5 403 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 OR8D1Q8WZ84 308 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 PPP1R14AQ96A00 147 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 CNN2Q99439 309 aaKnown RBP9□□□□□ -0.97
NUDCD1-201ENST00000239690 SYNPO2LQ9H987 977 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 PPT2Q9UMR5 302 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 C2orf74A8MZ97 194 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 D6RAR5 112 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 POP7O75817 140 aaKnown RBP9□□□□□ -0.97
NUDCD1-201ENST00000239690 CSF1P09603 554 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 SNRPBP14678 240 aaKnown RBP9□□□□□ -0.97
NUDCD1-201ENST00000239690 AHCYP23526 432 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 AOAHP28039 575 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 FRKP42685 505 aaPredicted RBP9□□□□□ -0.97
NUDCD1-201ENST00000239690 RNF144AP50876 292 aaPredicted RBP9□□□□□ -0.97
NUDCD1-201ENST00000239690 PUM1Q14671 1186 aaKnown RBP eCLIP9□□□□□ -0.97
NUDCD1-201ENST00000239690 RNASE10Q5GAN6 216 aaKnown RBP9□□□□□ -0.97
NUDCD1-201ENST00000239690 C18orf63Q68DL7 685 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 KLHL24Q6TFL4 600 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 LYPD8Q6UX82 237 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 PGBD5Q8N414 524 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 CLRN3Q8NCR9 226 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 TFGQ92734 400 aaPredicted RBP9□□□□□ -0.97
NUDCD1-201ENST00000239690 UCN3Q969E3 161 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 C10orf90Q96M02 699 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 NKX6-2Q9C056 277 aaPredicted RBP9□□□□□ -0.97
NUDCD1-201ENST00000239690 C20orf85Q9H1P6 137 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 MCCC2Q9HCC0 563 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 NIT2Q9NQR4 276 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 ACER3Q9NUN7 267 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 PGAP2Q9UHJ9 254 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 ASB1Q9Y576 335 aa9□□□□□ -0.97
NUDCD1-201ENST00000239690 TRAV18A0A075B6X5 111 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 TMEM88BA6NKF7 163 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 FAM183AA6NL82 134 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 DRGXA6NNA5 263 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 NDUFS4O43181 175 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 KLK8O60259 260 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 TPT1P13693 172 aaKnown RBP8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 PGAM2P15259 253 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 ZP3P21754 424 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 IDSP22304 550 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 MAOBP27338 520 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 ITPKBP27987 946 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 RGRP47804 291 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 GPR17Q13304 367 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 MAPK14Q16539 360 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 FXNQ16595 210 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 PGGHGQ32M88 737 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 FAM219BQ5XKK7 198 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 GLT8D1Q68CQ7 371 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 ARHGAP11AQ6P4F7 1023 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 TSSK4Q6SA08 328 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 PAQR6Q6TCH4 344 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 ENPP7Q6UWV6 458 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 L3MBTL4Q8NA19 623 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 LHFPL5Q8TAF8 219 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 F2RL3Q96RI0 385 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 ZNF700Q9H0M5 742 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 FBXL2Q9UKC9 423 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 CAMK2AQ9UQM7 478 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 MRPS33Q9Y291 106 aaKnown RBP8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 SCN7AQ01118 1682 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 MTMR11A4FU01 709 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 CASC3O15234 703 aaKnown RBP8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 ACSM4P0C7M7 580 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 ELAVL4P26378 380 aaKnown RBP8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 AQP2P41181 271 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 RPL34P49207 117 aaKnown RBP8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 TMEM115Q12893 351 aaPredicted RBP8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 BAMBIQ13145 260 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 NXPE4Q6UWF7 544 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 MFSD8Q8NHS3 518 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 THEM6Q8WUY1 208 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 CHTF18Q8WVB6 975 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 THAP4Q8WY91 577 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 C1QTNF7Q9BXJ2 289 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 MYNNQ9NPC7 610 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 RPS10P5Q9NQ39 176 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 INPP5EQ9NRR6 644 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 ZFC3H1O60293 1989 aaKnown RBP8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 MEIS3P2A8K0S8 358 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 NPC1O15118 1278 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 TAPBPO15533 448 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 CHP2O43745 196 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 IFNA17P01571 189 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 PRNPP04156 253 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 GIPP09681 153 aaPredicted RBP8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 RPL17P18621 184 aaKnown RBP8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 ETV5P41161 510 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 CBX5P45973 191 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 XCR1P46094 333 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 SRP9P49458 86 aaKnown RBP8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 CCR9P51686 369 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 PEA15Q15121 130 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 P2RY14Q15391 338 aa8.99□□□□□ -0.97
NUDCD1-201ENST00000239690 FAM110CQ1W6H9 321 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms