RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SLC29A4Q7RTT9 530 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 ZNF605Q86T29 641 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 CARM1Q86X55 608 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 CBR4Q8N4T8 237 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 OR52P1PQ8NH57 321 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 RMND5BQ96G75 393 aaPredicted RBP14.22□□□□□ -0.13
CLN6-219ENST00000637329 RDH12Q96NR8 316 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 PIP5K1AQ99755 562 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 ARHGDIGQ99819 225 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 Q9H521 79 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 ARMC7Q9H6L4 198 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 USE1Q9NZ43 259 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 KCND3Q9UK17 655 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 MRTO4Q9UKD2 239 aaKnown RBP14.22□□□□□ -0.13
CLN6-219ENST00000637329 CBLCQ9ULV8 474 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 ZNF232Q9UNY5 417 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 FAM32AQ9Y421 112 aaKnown RBP14.22□□□□□ -0.13
CLN6-219ENST00000637329 OR10H1Q9Y4A9 318 aa14.22□□□□□ -0.13
CLN6-219ENST00000637329 LOC102723996A0A087X1L8 192 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 A0A1W2PQ72 361 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 GXYLT2A0PJZ3 443 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 PRAMEF25A6NGN4 478 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 A8MUA0 341 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 SOCS2O14508 198 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 EI24O14681 340 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 TO15178 435 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 FCMRO60667 390 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 IGHEP01854 428 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 RAB40ALP0C0E4 278 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 FTH1P19P0C7X4 201 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 NID1P14543 1247 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 TNFRSF1BP20333 461 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 OR1E2P47887 323 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 ALDH3A2P51648 485 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 DAG1Q14118 895 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 TAF11Q15544 211 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 DECR1Q16698 335 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 FLYWCH1Q4VC44 716 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 CCNJQ5T5M9 372 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 WLSQ5T9L3 541 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 LCN10Q6JVE6 187 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 C6orf15Q6UXA7 325 aaPredicted RBP14.21□□□□□ -0.13
CLN6-219ENST00000637329 SHISA6Q6ZSJ9 500 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 CPEB2Q7Z5Q1 589 aaKnown RBP14.21□□□□□ -0.13
CLN6-219ENST00000637329 TSEN54Q7Z6J9 526 aaKnown RBP14.21□□□□□ -0.13
CLN6-219ENST00000637329 GALNT6Q8NCL4 622 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 B3GNT7Q8NFL0 401 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 OR2Y1Q8NGV0 311 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 OR8K3Q8NH51 312 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 LCORQ96JN0 433 aaPredicted RBP14.21□□□□□ -0.13
CLN6-219ENST00000637329 LPAR4Q99677 370 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 RBM4BQ9BQ04 359 aaKnown RBP14.21□□□□□ -0.13
CLN6-219ENST00000637329 RBM4Q9BWF3 364 aaKnown RBP14.21□□□□□ -0.13
CLN6-219ENST00000637329 AMBRA1Q9C0C7 1298 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 POLR2J2Q9GZM3 115 aaKnown RBP14.21□□□□□ -0.13
CLN6-219ENST00000637329 WWTR1Q9GZV5 400 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 POLR2J3Q9H1A7 115 aaKnown RBP14.21□□□□□ -0.13
CLN6-219ENST00000637329 ACAD8Q9UKU7 415 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 MKLN1Q9UL63 735 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 RAB26Q9ULW5 256 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 LRCH1Q9Y2L9 728 aa14.21□□□□□ -0.13
CLN6-219ENST00000637329 SAMHD1Q9Y3Z3 626 aaKnown RBP14.21□□□□□ -0.13
CLN6-219ENST00000637329 C2orf92A0A1B0GVN3 265 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 ARRDC5A6NEK1 342 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 CCNYL3P0C7X3 344 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 IL7RP16871 459 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 RRM2P31350 389 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 GPR143P51810 404 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 SMIM11AP58511 58 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 EEF1A1P68104 462 aaKnown RBP14.2□□□□□ -0.14
CLN6-219ENST00000637329 EPS8Q12929 822 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 GPR68Q15743 365 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 HLA-DQA1Q5Y7H0 255 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 FIGNL1Q6PIW4 674 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 PAPD4Q6PIY7 484 aaKnown RBP14.2□□□□□ -0.14
CLN6-219ENST00000637329 OLIG3Q7RTU3 272 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 SLCO6A1Q86UG4 719 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 C9orf40Q8IXQ3 194 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 CMIPQ8IY22 773 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 ESX1Q8N693 406 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 ZNF441Q8N8Z8 693 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 NFAM1Q8NET5 270 aaPredicted RBP14.2□□□□□ -0.14
CLN6-219ENST00000637329 SLC35B4Q969S0 331 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 ADIPOR1Q96A54 375 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 HSPBAP1Q96EW2 488 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 VMP1Q96GC9 406 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 DHRS1Q96LJ7 313 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 PRRC1Q96M27 445 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 PSD2Q9BQI7 771 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 NUDT9Q9BW91 350 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 OSBPL11Q9BXB4 747 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 SPRY4Q9C004 299 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 QRSL1Q9H0R6 528 aaKnown RBP14.2□□□□□ -0.14
CLN6-219ENST00000637329 VNN3Q9NY84 501 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 LYVE1Q9Y5Y7 322 aa14.2□□□□□ -0.14
CLN6-219ENST00000637329 SPEGQ15772 3267 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 C9orf172C9J069 976 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 NPIPB9F8W1W9 429 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 UGT2B17O75795 530 aa14.19□□□□□ -0.14
CLN6-219ENST00000637329 KLF7O75840 302 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms