RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ZNF311Q5JNZ3 666 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 OR4C11Q6IEV9 310 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 TMEM64Q6YI46 380 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 OAFQ86UD1 273 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 VRK2Q86Y07 508 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 NKAIN4Q8IVV8 208 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 GPR135Q8IZ08 494 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 ZNF655Q8N720 491 aaPredicted RBP18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 ZNF680Q8NEM1 530 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 OR11H4Q8NGC9 324 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 HSD17B8Q92506 261 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 NR4A3Q92570 626 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 ZG16BQ96DA0 208 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 C16orf58Q96GQ5 468 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 KCNN2Q9H2S1 579 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 GLTPQ9NZD2 209 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 GPR34Q9UPC5 381 aa18.32■□□□□ 0.52
PDLIM3-212ENST00000620787 A0A1B0GVC2 190 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 A6NIN4 97 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 GLOD5A6NK44 160 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 B8ZZF3 427 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 EEF1E1O43324 174 aaKnown RBP18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 KLF4O43474 513 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 DHFRP00374 187 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 NTSP30990 170 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 TALDO1P37837 337 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 RNF144AP50876 292 aaPredicted RBP18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 TRA2BP62995 288 aaKnown RBP18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 IKZF1Q13422 519 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 NTRK2Q16620 822 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 ZNF793Q6ZN11 406 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 ZNF620Q6ZNG0 422 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 RRM2BQ7LG56 351 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 SAMD12Q8N8I0 201 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 BMPERQ8N8U9 685 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 SPERTQ8NA61 448 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 SFXN5Q8TD22 340 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 TFGQ92734 400 aaPredicted RBP18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 BBS4Q96RK4 519 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 TIMP4Q99727 224 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 RANBP3Q9H6Z4 567 aaPredicted RBP18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 HEXA-AS1Q9H8Q6 139 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 NUDT15Q9NV35 164 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 IL20RAQ9UHF4 553 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 NTNG1Q9Y2I2 539 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 MAN2B1O00754 1011 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 OR1F1O43749 312 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 LCMT2O60294 686 aaKnown RBP18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 LZTS3O60299 673 aaPredicted RBP18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 LILRB3O75022 631 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 SHC1P29353 583 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 PITPNBP48739 271 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 DUSP2Q05923 314 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 GJD3Q8N144 294 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 OR51G2Q8NGK0 314 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 C17orf62Q9BQA9 187 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 SLC38A1Q9H2H9 487 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 ANKRD19PQ9H560 264 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 HCFC1R1Q9NWW0 138 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 ZNF222Q9UK12 451 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 PDE4DIPQ5VU43 2346 aa18.31■□□□□ 0.52
PDLIM3-212ENST00000620787 A0A1W2PPV9 198 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 PRR23AA6NEV1 266 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 BTN3A3O00478 584 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 PIP5K1CO60331 668 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 RAF1P04049 648 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 TPOP07202 933 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 SSR2P43308 183 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 ANXA11P50995 505 aaKnown RBP18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 ZNF750Q32MQ0 723 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 ZNF697Q5TEC3 545 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 PRAMEF8Q5VWM4 474 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 FAM46CQ5VWP2 391 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 PRAMEF7Q5VXH5 474 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 SDE2Q6IQ49 451 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 CPOQ8IVL8 374 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 ACOT11Q8WXI4 607 aaPredicted RBP18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 KCTD12Q96CX2 325 aaKnown RBP18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 ART5Q96L15 291 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 FCRL4Q96PJ5 515 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 MENTQ9BUN1 341 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 TEX12Q9BXU0 123 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 THY1P04216 161 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 C8AP07357 584 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 NPR2P20594 1047 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 SRP9P49458 86 aaKnown RBP18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 ARHGAP19Q14CB8 494 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 DECR1Q16698 335 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 ZNF765Q7L2R6 523 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 NRMQ8IXM6 262 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 TCEAL4Q96EI5 215 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 ABHD1Q96SE0 405 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 RASD1Q9Y272 281 aa18.3■□□□□ 0.52
PDLIM3-212ENST00000620787 FAM183AA6NL82 134 aa18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 ERAL1O75616 437 aaKnown RBP18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 ANXA3P12429 323 aa18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 C6P13671 934 aa18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 ACSL1P33121 698 aa18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 RGS1Q08116 209 aa18.29■□□□□ 0.52
PDLIM3-212ENST00000620787 SLC36A2Q495M3 483 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms