RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 TGM1P22735 817 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 NTSR1P30989 418 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 TGFBR2P37173 567 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 PITPNAQ00169 270 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 HYAL2Q12891 473 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 ZNF267Q14586 743 aaPredicted RBP8.15□□□□□ -1.1
LIG4-204ENST00000611712 PGGHGQ32M88 737 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 PUS10Q3MIT2 529 aaKnown RBP8.15□□□□□ -1.1
LIG4-204ENST00000611712 ELOA3BQ3SY89 546 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 PLK5Q496M5 336 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 C3orf38Q5JPI3 329 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 ARTNQ5T4W7 220 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 ABHD17CQ6PCB6 329 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 CCDC71Q8IV32 467 aaPredicted RBP8.15□□□□□ -1.1
LIG4-204ENST00000611712 ANKRD53Q8N9V6 530 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 ELOA3Q8NG57 546 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 OR2L3Q8NG85 312 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 GAL3ST3Q96A11 431 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 CHFRQ96EP1 664 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 TXNDC15Q96J42 360 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 OPALINQ96PE5 141 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 GAL3ST4Q96RP7 486 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 TIMM29Q9BSF4 260 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 ALG8Q9BVK2 526 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 DPAGT1Q9H3H5 408 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 BEX1Q9HBH7 125 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 Q9N2J8 555 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 TMEM138Q9NPI0 162 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 CDH10Q9Y6N8 788 aa8.15□□□□□ -1.1
LIG4-204ENST00000611712 ZSWIM8A7E2V4 1837 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 A8MVJ9 347 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 B4DGG1 531 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 CHURC1-FNTBB4DL54 471 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 LYRM1O43325 122 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 KCNJ13O60928 360 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 PIPP12273 146 aaPredicted RBP8.15□□□□□ -1.11
LIG4-204ENST00000611712 SLC1A3P43003 542 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 CAPZA2P47755 286 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 MAN2A2P49641 1150 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 CRYZQ08257 329 aaKnown RBP8.15□□□□□ -1.11
LIG4-204ENST00000611712 PDE7AQ13946 482 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 RPE65Q16518 533 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 ZNF542PQ5EBM4 170 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 SNAP47Q5SQN1 464 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 TANGO2Q6ICL3 276 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 PRR23CQ6ZRP0 262 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 GPALPP1Q8IXQ4 340 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 OR51L1Q8NGJ5 315 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 HS6ST2Q96MM7 605 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 ALOXE3Q9BYJ1 711 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 TCF7L1Q9HCS4 588 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 PCDHGA3Q9Y5H0 932 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 SCN4AP35499 1836 aa8.15□□□□□ -1.11
LIG4-204ENST00000611712 A0A087WUU8 490 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 A0A1B0GVC2 190 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 A0A1W2PR48 441 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 A6NIN4 97 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 BLOC1S5-TXNDC5H3BN57 136 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 FLRT2O43155 660 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 LDB3O75112 727 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 TNFP01375 233 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 RLN1P04808 185 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 APEX1P27695 318 aaKnown RBP8.14□□□□□ -1.11
LIG4-204ENST00000611712 ETV5P41161 510 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 OMPP47874 163 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 SOX9P48436 509 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 ETV1P50549 477 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 C21orf58P58505 322 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 OCLNQ16625 522 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 PPP2R2DQ66LE6 453 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 THOC7Q6I9Y2 204 aaKnown RBP8.14□□□□□ -1.11
LIG4-204ENST00000611712 LAIR2Q6ISS4 152 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 ZC3H14Q6PJT7 736 aaKnown RBP8.14□□□□□ -1.11
LIG4-204ENST00000611712 PRICKLE2Q7Z3G6 844 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 PRSS58Q8IYP2 241 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 FAM26EQ8N5C1 309 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 C1orf216Q8TAB5 229 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 TMEM239Q8WW34 195 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 HDAC8Q9BY41 377 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 OR52D1Q9H346 318 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 C14orf105Q9NVL8 296 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 OR6C2Q9NZP2 312 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 YARS2Q9Y2Z4 477 aaKnown RBP8.14□□□□□ -1.11
LIG4-204ENST00000611712 UGT2A1Q9Y4X1 527 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 ARID1BQ8NFD5 2236 aaPredicted RBP8.14□□□□□ -1.11
LIG4-204ENST00000611712 A0A1B0GVT2 93 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 UBE2QL1A1L167 161 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 C2orf74A8MZ97 194 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 NCR1O76036 304 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 LGI1O95970 557 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 TGM4P49221 684 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 PUM1Q14671 1186 aaKnown RBP eCLIP8.14□□□□□ -1.11
LIG4-204ENST00000611712 BTBD16Q32M84 506 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 RPL13AP3Q6NVV1 102 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 CSNK1A1LQ8N752 337 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 SYT14Q8NB59 555 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 SLC16A11Q8NCK7 471 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 TRIM43Q96BQ3 446 aaPredicted RBP8.14□□□□□ -1.11
LIG4-204ENST00000611712 DGAT2Q96PD7 388 aa8.14□□□□□ -1.11
LIG4-204ENST00000611712 BTBD2Q9BX70 525 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms