RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 NTNG1Q9Y2I2 539 aa18.35■□□□□ 0.53
CLIP3-206ENST00000593074 CENPVL1A0A0U1RR11 272 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 SGK494L7N484 410 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 CDH3P22223 829 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.34■□□□□ 0.53
CLIP3-206ENST00000593074 CCNJQ5T5M9 372 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 SLC27A4Q6P1M0 643 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 GDF7Q7Z4P5 450 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 ATCAYQ86WG3 371 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 SIX5Q8N196 739 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 ARL14Q8N4G2 192 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 KBTBD8Q8NFY9 601 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 TEX47Q8TBZ9 253 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 ANKRD9Q96BM1 317 aaPredicted RBP18.34■□□□□ 0.53
CLIP3-206ENST00000593074 RACGAP1Q9H0H5 632 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 MIR1-1HGQ9H1L0 117 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 GALNT8Q9NY28 637 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 CCRL2O00421 344 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 KIAA0513O60268 411 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 STX11O75558 287 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 UBXN7O94888 489 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 NTN1O95631 604 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 FPR3P25089 353 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 ZNF136P52737 540 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 RPL6Q02878 288 aaKnown RBP18.34■□□□□ 0.53
CLIP3-206ENST00000593074 BTLAQ7Z6A9 289 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 MEX3DQ86XN8 651 aaKnown RBP18.34■□□□□ 0.53
CLIP3-206ENST00000593074 NKAIN4Q8IVV8 208 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 OR8D4Q8NGM9 314 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 SLC41A3Q96GZ6 507 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 FAM46AQ96IP4 442 aaKnown RBP18.34■□□□□ 0.53
CLIP3-206ENST00000593074 LRR1Q96L50 414 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 ZNF582Q96NG8 517 aaPredicted RBP18.34■□□□□ 0.53
CLIP3-206ENST00000593074 OPALINQ96PE5 141 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 CNIH4Q9P003 139 aa18.34■□□□□ 0.53
CLIP3-206ENST00000593074 KLF4O43474 513 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 RDH16O75452 317 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 AK1P00568 194 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 SCG5P05408 212 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 CT62P0C5K7 136 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 BMP4P12644 408 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 TSTQ16762 297 aaKnown RBP18.33■□□□□ 0.52
CLIP3-206ENST00000593074 DEFB110Q30KQ9 67 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 TIMM50Q3ZCQ8 353 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 SPEM1Q8N4L4 309 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 COX18Q8N8Q8 333 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 TMEM163Q8TC26 289 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 MND1Q9BWT6 205 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 DSN1Q9H410 356 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 ARMC7Q9H6L4 198 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 CCDC59Q9P031 241 aaKnown RBP18.33■□□□□ 0.52
CLIP3-206ENST00000593074 A3GALT2U3KPV4 340 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 TRIOBPQ9H2D6 2365 aa18.33■□□□□ 0.52
CLIP3-206ENST00000593074 TNRC18O15417 2968 aaPredicted RBP18.33■□□□□ 0.52
CLIP3-206ENST00000593074 MAGEB3O15480 346 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 SULT1C4O75897 302 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 DBIP07108 87 aaKnown RBP18.32■□□□□ 0.52
CLIP3-206ENST00000593074 FASLGP48023 281 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 GPR68Q15743 365 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 SSX1Q16384 188 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 MAPK14Q16539 360 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 PRTGQ2VWP7 1150 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 MBOAT2Q6ZWT7 520 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 RRM2BQ7LG56 351 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 OR9A4Q8NGU2 314 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 DOK4Q8TEW6 326 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 CHPT1Q8WUD6 406 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 HOXB13Q92826 284 aaPredicted RBP18.32■□□□□ 0.52
CLIP3-206ENST00000593074 CDX2Q99626 313 aaPredicted RBP18.32■□□□□ 0.52
CLIP3-206ENST00000593074 CENPOQ9BU64 300 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 POLR2J2Q9GZM3 115 aaKnown RBP18.32■□□□□ 0.52
CLIP3-206ENST00000593074 FAIMQ9NVQ4 179 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 TESQ9UGI8 421 aaKnown RBP18.32■□□□□ 0.52
CLIP3-206ENST00000593074 DIMT1Q9UNQ2 313 aaKnown RBP18.32■□□□□ 0.52
CLIP3-206ENST00000593074 LOC100506127A0A0U1RQW1 187 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 METTL15A6NJ78 407 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 STK25O00506 426 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 ARHGAP33O14559 1287 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 CSO75390 466 aaKnown RBP18.32■□□□□ 0.52
CLIP3-206ENST00000593074 CTSBP07858 339 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 NID1P14543 1247 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 ENDOUP21128 410 aaKnown RBP18.32■□□□□ 0.52
CLIP3-206ENST00000593074 EXOSC7Q15024 291 aaKnown RBP18.32■□□□□ 0.52
CLIP3-206ENST00000593074 SNAPC1Q16533 368 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 POGLUT1Q8NBL1 392 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 MCFD2Q8NI22 146 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 PIK3R3Q92569 461 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 PMM1Q92871 262 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 CHCHD6Q9BRQ6 235 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 NXF2Q9GZY0 626 aaKnown RBP18.32■□□□□ 0.52
CLIP3-206ENST00000593074 MMP27Q9H306 513 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 TBCCD1Q9NVR7 557 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 CLEC2DQ9UHP7 191 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 CLCA2Q9UQC9 943 aa18.32■□□□□ 0.52
CLIP3-206ENST00000593074 TMEM131Q92545 1883 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 SCN2AQ99250 2005 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 SLC9B1P1A6NJY1 282 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 SLC35E2P0CK97 266 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 STAT5AP42229 794 aa18.31■□□□□ 0.52
CLIP3-206ENST00000593074 SPHARQ15513 63 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms