RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 KCNE3Q9Y6H6 103 aa13.4□□□□□ -0.26
SCAMP4-209ENST00000585335 LAMA5O15230 3695 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 ANKRD33BA6NCL7 494 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 SCDO00767 359 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 PEX1O43933 1283 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 ICOSLGO75144 302 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 SNX4O95219 450 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 RASAL1O95294 804 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 UTS2O95399 124 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 GUSBP08236 651 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 EVI2BP34910 448 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 MASP1P48740 699 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 MVDP53602 400 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 CRISP3P54108 245 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 MTPNP58546 118 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 NFATC3Q12968 1075 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 PLEKHN1Q494U1 663 aaPredicted RBP13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 NANOGP8Q6NSW7 305 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 SLC30A6Q6NXT4 461 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 RPUSD3Q6P087 351 aaKnown RBP13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 GALNT10Q86SR1 603 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 PACS2Q86VP3 889 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 PTRH1Q86Y79 214 aaKnown RBP13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 METTL25Q8N6Q8 603 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 OIT3Q8WWZ8 545 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 PMM1Q92871 262 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 NSL1Q96IY1 281 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 ZNF597Q96LX8 424 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 ECSITQ9BQ95 431 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 DOHHQ9BU89 302 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 NANOGQ9H9S0 305 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 SH2D2AQ9NP31 389 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 A4GALTQ9NPC4 353 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 ARL8BQ9NVJ2 186 aa13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 CNOT11Q9UKZ1 510 aaKnown RBP13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 BOKQ9UMX3 212 aaPredicted RBP13.39□□□□□ -0.27
SCAMP4-209ENST00000585335 H3BNH8 94 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 FXYD1O00168 92 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 IGKV1D-16P01601 117 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 CRYABP02511 175 aaKnown RBP13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 BCHEP06276 602 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 NGFRP08138 427 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 BMP2P12643 396 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 ENDOUP21128 410 aaKnown RBP13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 TBXA2RP21731 343 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 CALB2P22676 271 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 DCTP40126 519 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 CASP3P42574 277 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 CPA2P48052 419 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 CBX1P83916 185 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 ZNF630Q2M218 657 aaPredicted RBP13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 PRAMEF20Q5VT98 475 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 FAM180AQ6UWF9 173 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 LRRC74BQ6ZQY2 392 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 SLC30A8Q8IWU4 369 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 SULF2Q8IWU5 870 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 OR2M7Q8NG81 312 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 NODALQ96S42 347 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 SLC39A3Q9BRY0 314 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 ANGPTL4Q9BY76 406 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 HES7Q9BYE0 225 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 ZNF350Q9GZX5 532 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 B4GALT7Q9UBV7 327 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 PCDHGA10Q9Y5H3 936 aa13.38□□□□□ -0.27
SCAMP4-209ENST00000585335 ITPR1Q14643 2758 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 G3V3Y1 287 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 ACOT7O00154 380 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 TNFRSF21O75509 655 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 H6PDO95479 791 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 C1QCP02747 245 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 SLC6A2P23975 617 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 MEOX1P50221 254 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 ATP12AP54707 1039 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 GPR85P60893 370 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 PLGLB1Q02325 96 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 RBBP4Q09028 425 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 GPR68Q15743 365 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 SYPL1Q16563 259 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 GRAMD1BQ3KR37 738 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 PRAMEF8Q5VWM4 474 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 PRAMEF7Q5VXH5 474 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 C16orf89Q6UX73 402 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 SERPINA11Q86U17 422 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 ZNF619Q8N2I2 560 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 ANKFN1Q8N957 763 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 C11orf65Q8NCR3 313 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 BBS10Q8TAM1 723 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 GRHL3Q8TE85 626 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 JSRP1Q96MG2 331 aaPredicted RBP13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 IKZF5Q9H5V7 419 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 TMEM38AQ9H6F2 299 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 KAT8Q9H7Z6 458 aaKnown RBP13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 LUZP4Q9P127 313 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 ANGPT4Q9Y264 503 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 WIF1Q9Y5W5 379 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 EXPH5Q8NEV8 1989 aa13.37□□□□□ -0.27
SCAMP4-209ENST00000585335 CNTRLQ7Z7A1 2325 aa13.36□□□□□ -0.27
SCAMP4-209ENST00000585335 A0A0G2JPF8 293 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms