RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 PEX11GQ96HA9 241 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 SPACA7Q96KW9 195 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 HSPA12BQ96MM6 686 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 ZNF582Q96NG8 517 aaPredicted RBP4.3□□□□□ -1.72
NUP85-213ENST00000579838 ZNF285Q96NJ3 590 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 GUCD1Q96NT3 240 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 OPALINQ96PE5 141 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 TGM7Q96PF1 710 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 LMF1Q96S06 567 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 MCHR1Q99705 422 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 KLHDC3Q9BQ90 382 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 FNDC11Q9BVV2 318 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 ITPAQ9BY32 194 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 ROGDIQ9GZN7 287 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 ZNF350Q9GZX5 532 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 SAP130Q9H0E3 1048 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 ENKD1Q9H0I2 346 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 POLR2J3Q9H1A7 115 aaKnown RBP4.3□□□□□ -1.72
NUP85-213ENST00000579838 MIR1-1HGQ9H1L0 117 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 PIGUQ9H490 435 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 ZNF556Q9HAH1 456 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 FOLH1BQ9HBA9 442 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 CCNB1IP1Q9NPC3 277 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 TIMMDC1Q9NPL8 285 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 AKIP1Q9NQ31 210 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 NECTIN3Q9NQS3 549 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 FSCN3Q9NQT6 498 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 TVP23BQ9NYZ1 205 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 FLRT3Q9NZU0 649 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 PTGFRNQ9P2B2 879 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 OSGIN1Q9UJX0 560 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 CARD8Q9Y2G2 431 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 WDR45Q9Y484 360 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 FER1L5A0AVI2 2057 aa4.3□□□□□ -1.72
NUP85-213ENST00000579838 TMEM265A0A087WTH1 108 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 A0A087WV62 115 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 ZC3H12DA2A288 527 aaKnown RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 TMEM247A6NEH6 219 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 URADA6NGE7 173 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 LILRA5A6NI73 299 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 AGAP5A6NIR3 686 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 METTL15A6NJ78 407 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 C17orf51A8MQB3 221 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 KDM4EB2RXH2 506 aaPredicted RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 H3BN98 237 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 WWP2O00308 870 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 SOCS6O14544 535 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 ARHGAP33O14559 1287 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 CDC42EP2O14613 210 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 ZSCAN9O15535 394 aaPredicted RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 AQP9O43315 295 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 PLOD3O60568 738 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 NOL3O60936 208 aaKnown RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 RFPL3O75679 317 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 GPX5O75715 221 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 CDC123O75794 336 aaPredicted RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 CLPXO76031 633 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 KCNK2O95069 426 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 OR5F1O95221 314 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 DCNP07585 359 aaKnown RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 HBQ1P09105 142 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 ALOX5P09917 674 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 CCNYL3P0C7X3 344 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 PIPP12273 146 aaPredicted RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 MAOAP21397 527 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 GABRA3P34903 492 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 ETV5P41161 510 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 GCGRP47871 477 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 FASLGP48023 281 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 CSNK1EP49674 416 aaKnown RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 ETV1P50549 477 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 ANXA11P50995 505 aaKnown RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 RGS8P57771 180 aaPredicted RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 FOXL2P58012 376 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 OR1D5P58170 312 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 CDC42P60953 191 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 POU6F2P78424 691 aaPredicted RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 PSG6Q00889 435 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 IFITM3Q01628 133 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 RPL6Q02878 288 aaKnown RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 TSPAN31Q12999 210 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 DCTN2Q13561 401 aaKnown RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 TRAM2Q15035 370 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 OR1Q1Q15612 314 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 NNATQ16517 81 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 OCLNQ16625 522 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 MOGQ16653 247 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 DECR1Q16698 335 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 TIGD6Q17RP2 521 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 C11orf91Q3C1V1 193 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 C14orf28Q4W4Y0 310 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 SYT14P1Q58G82 188 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 ARMCX4Q5H9R4 360 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 MRPL2Q5T653 305 aaKnown RBP4.29□□□□□ -1.72
NUP85-213ENST00000579838 ATAD3BQ5T9A4 648 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 ZNF787Q6DD87 383 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 DESI1Q6ICB0 168 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 ARMC6Q6NXE6 501 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 OGFOD3Q6PK18 319 aa4.29□□□□□ -1.72
NUP85-213ENST00000579838 C19orf48Q6RUI8 117 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms