RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 GABRA3P34903 492 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 MAP3K8P41279 467 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 AP2B1P63010 937 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 C19orf57Q0VDD7 668 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 BIKQ13323 160 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 RPS6KA2Q15349 733 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 NTRK2Q16620 822 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 PAGE3Q5JUK9 113 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 SAMD4BQ5PRF9 694 aaKnown RBP7.25□□□□□ -1.25
CCDC40-215ENST00000576033 EXOSC6Q5RKV6 272 aaKnown RBP7.25□□□□□ -1.25
CCDC40-215ENST00000576033 C6orf10Q5SRN2 563 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 WLSQ5T9L3 541 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 FNDC7Q5VTL7 733 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 SLC25A25Q6KCM7 469 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 TNFAIP8L2Q6P589 184 aaPredicted RBP7.25□□□□□ -1.25
CCDC40-215ENST00000576033 RTL4Q6ZR62 310 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 MSANTD1Q6ZTZ1 278 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 NCCRP1Q6ZVX7 275 aaPredicted RBP7.25□□□□□ -1.25
CCDC40-215ENST00000576033 FGD2Q7Z6J4 655 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 ARPINQ7Z6K5 226 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 SPPL2CQ8IUH8 684 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 SIAH3Q8IW03 269 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 MSRB3Q8IXL7 192 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 BCORP1Q8N888 145 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 GATSQ8NAP1 163 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 OR2M7Q8NG81 312 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 OR8J2Q8NGG1 315 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 OR52N2Q8NGI0 321 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 ZFP28Q8NHY6 868 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 OR5P2Q8WZ92 322 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 RAB8BQ92930 207 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 TMEM125Q96AQ2 219 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 JSRP1Q96MG2 331 aaPredicted RBP7.25□□□□□ -1.25
CCDC40-215ENST00000576033 C5orf34Q96MH7 638 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 ANKRD27Q96NW4 1050 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 LMF2Q9BU23 707 aaKnown RBP7.25□□□□□ -1.25
CCDC40-215ENST00000576033 ACSS1Q9NUB1 689 aaPredicted RBP7.25□□□□□ -1.25
CCDC40-215ENST00000576033 CMTM6Q9NX76 183 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 ANAPC2Q9UJX6 822 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 WBP11Q9Y2W2 641 aaKnown RBP7.25□□□□□ -1.25
CCDC40-215ENST00000576033 L3MBTL1Q9Y468 752 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 ZNF407Q9C0G0 2248 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 TCRBV3S1A0A5B6 114 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 SYNDIG1LA6NDD5 238 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 CCDC154A6NI56 674 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 RNASET2O00584 256 aaKnown RBP7.24□□□□□ -1.25
CCDC40-215ENST00000576033 GNB5O14775 395 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 CASQ2O14958 399 aaPredicted RBP7.24□□□□□ -1.25
CCDC40-215ENST00000576033 EMC8O43402 210 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 OIP5O43482 229 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 SCO2O43819 266 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 COQ9O75208 318 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 PDE9AO76083 593 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 WISP1O95388 367 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 IL6P05231 212 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 ANPEPP15144 967 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 CD46P15529 392 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 RPL3P39023 403 aaKnown RBP7.24□□□□□ -1.25
CCDC40-215ENST00000576033 MAGEA5P43359 124 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 PPICP45877 212 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 CCT3P49368 545 aaKnown RBP7.24□□□□□ -1.25
CCDC40-215ENST00000576033 MAN2A2P49641 1150 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 SLC7A2P52569 658 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 CLNS1AP54105 237 aaKnown RBP7.24□□□□□ -1.25
CCDC40-215ENST00000576033 EEFSECP57772 596 aaKnown RBP7.24□□□□□ -1.25
CCDC40-215ENST00000576033 MRPS22P82650 360 aaKnown RBP7.24□□□□□ -1.25
CCDC40-215ENST00000576033 FOXK1P85037 733 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 SLC34A1Q06495 639 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 FOXO1Q12778 655 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 SELPLGQ14242 412 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 TRIM25Q14258 630 aaKnown RBP7.24□□□□□ -1.25
CCDC40-215ENST00000576033 MLC1Q15049 377 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 NDUFAF6Q330K2 333 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 GRAMD1BQ3KR37 738 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 MMEL1Q495T6 779 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 CMPK2Q5EBM0 449 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 LRIF1Q5T3J3 769 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 ZNF324BQ6AW86 544 aaPredicted RBP7.24□□□□□ -1.25
CCDC40-215ENST00000576033 OR5M10Q6IEU7 315 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 OPN5Q6U736 354 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 APOOLQ6UXV4 268 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 ZNF605Q86T29 641 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 RNF130Q86XS8 419 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 CHERPQ8IWX8 916 aaKnown RBP7.24□□□□□ -1.25
CCDC40-215ENST00000576033 SAMD14Q8IZD0 417 aaPredicted RBP7.24□□□□□ -1.25
CCDC40-215ENST00000576033 TAGAPQ8N103 731 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 SLC34A3Q8N130 599 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 HORMAD2Q8N7B1 307 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 GOLM1Q8NBJ4 401 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 DNAJB8Q8NHS0 232 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 PSMA8Q8TAA3 256 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 SPPL2AQ8TCT8 520 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 GPR151Q8TDV0 419 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 PAQR8Q8TEZ7 354 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 NRG4Q8WWG1 115 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 GTF2H4Q92759 462 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 DIO2Q92813 273 aa7.24□□□□□ -1.25
CCDC40-215ENST00000576033 HOXB13Q92826 284 aaPredicted RBP7.24□□□□□ -1.25
CCDC40-215ENST00000576033 CCDC124Q96CT7 223 aaKnown RBP7.24□□□□□ -1.25
CCDC40-215ENST00000576033 SLC35A4Q96G79 324 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms