RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 OR52N1Q8NH53 320 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 SNAPC3Q92966 411 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 PRDM7Q9NQW5 492 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 ASB6Q9NWX5 421 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 SLC27A6Q9Y2P4 619 aa17.84■□□□□ 0.45
SCARF1-206ENST00000573852 C5orf42Q9H799 3197 aa17.83■□□□□ 0.45
SCARF1-206ENST00000573852 FAM183AA6NL82 134 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 HRO43593 1189 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 ACRP10323 421 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 HIST1H1TP22492 207 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-206ENST00000573852 MC3RP41968 323 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 CSTF1Q05048 431 aaKnown RBP17.83■□□□□ 0.44
SCARF1-206ENST00000573852 LRRC32Q14392 662 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 ZIC1Q15915 447 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 BTBD16Q32M84 506 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 C6orf132Q5T0Z8 1188 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 ZNF697Q5TEC3 545 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 PRAMEF8Q5VWM4 474 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 PRAMEF7Q5VXH5 474 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 GRASPQ7Z6J2 395 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-206ENST00000573852 OR4M2Q8NGB6 313 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 MS4A6EQ96DS6 147 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 HINT3Q9NQE9 182 aaKnown RBP17.83■□□□□ 0.44
SCARF1-206ENST00000573852 ING3Q9NXR8 418 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 ORC5O43913 435 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 FCMRO60667 390 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 EVI2BP34910 448 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 P2RY2P41231 377 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 DBPQ10586 325 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-206ENST00000573852 MRM1Q6IN84 353 aaKnown RBP17.83■□□□□ 0.44
SCARF1-206ENST00000573852 CPOQ8IVL8 374 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 DTX3Q8N9I9 347 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 TMEM255BQ8WV15 326 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 ZFPM2Q8WW38 1151 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 ACOT11Q8WXI4 607 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-206ENST00000573852 OTULINQ96BN8 352 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 RSPRY1Q96DX4 576 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 TOX2Q96NM4 488 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 INSM2Q96T92 566 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-206ENST00000573852 PAK6Q9NQU5 681 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-206ENST00000573852 CES1P1Q9UKY3 287 aa17.83■□□□□ 0.44
SCARF1-206ENST00000573852 SIRT4Q9Y6E7 314 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-206ENST00000573852 DOCK9Q9BZ29 2069 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 SNRNP200O75643 2136 aaKnown RBP17.82■□□□□ 0.44
SCARF1-206ENST00000573852 INMT-MINDY4F8WBC2 141 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 ARHGEF9O43307 516 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 KLF4O43474 513 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 LATO43561 262 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 DECR1Q16698 335 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 TMEM35AQ53FP2 167 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 IDNKQ5T6J7 187 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 ZNF620Q6ZNG0 422 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 NUP43Q8NFH3 380 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 OR4M1Q8NGD0 313 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 OR9A2Q8NGT5 310 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 ART5Q96L15 291 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 TNFRSF10DQ9UBN6 386 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 EXTL2Q9UBQ6 330 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 ENTPD4Q9Y227 616 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 GTPBP1O00178 669 aaKnown RBP17.82■□□□□ 0.44
SCARF1-206ENST00000573852 EMC8O43402 210 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 LANCL1O43813 399 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 EFCAB14O75071 495 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 ATP5A1P25705 553 aaKnown RBP17.82■□□□□ 0.44
SCARF1-206ENST00000573852 ADAM15Q13444 863 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 CCDC85BQ15834 202 aaPredicted RBP17.82■□□□□ 0.44
SCARF1-206ENST00000573852 ABHD17CQ6PCB6 329 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 PLEKHM3Q6ZWE6 761 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 GDF7Q7Z4P5 450 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 OR51G2Q8NGK0 314 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 NR4A3Q92570 626 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 CAPNS2Q96L46 248 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 C12orf66Q96MD2 445 aa17.82■□□□□ 0.44
SCARF1-206ENST00000573852 IGLON5A6NGN9 336 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 OTOL1A6NHN0 477 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-206ENST00000573852 CDC42EP2O14613 210 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 SLC19A2O60779 497 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 OR2B3O76000 313 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 PAHP00439 452 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 CFL1P23528 166 aaKnown RBP17.81■□□□□ 0.44
SCARF1-206ENST00000573852 CERS1P27544 350 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 RGS8P57771 180 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-206ENST00000573852 PRR5P85299 388 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 ZNF234Q14588 700 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 ETFBKMTQ8IXQ9 262 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 GJD3Q8N144 294 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 KAT2AQ92830 837 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 SAMD8Q96LT4 415 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 FCRL4Q96PJ5 515 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 MCHR1Q99705 422 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 GTPBP2Q9BX10 602 aaKnown RBP17.81■□□□□ 0.44
SCARF1-206ENST00000573852 ANKRD19PQ9H560 264 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 SYNPO2LQ9H987 977 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 MED17Q9NVC6 651 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 PTGFRNQ9P2B2 879 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 ADAM30Q9UKF2 790 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 TRPM6Q9BX84 2022 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 ZC3H12DA2A288 527 aaKnown RBP17.81■□□□□ 0.44
SCARF1-206ENST00000573852 J3QRE1 110 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 RNF13O43567 381 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms