RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SCO2O43819 266 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 STX2P32856 288 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 SLC6A8P48029 635 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 PSG6Q00889 435 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 ZNF672Q499Z4 452 aaPredicted RBP16.57■□□□□ 0.24
TPM1-226ENST00000560959 GTF2IRD2BQ6EKJ0 949 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 GTF2IRD2Q86UP8 949 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 OR5M1Q8NGP8 315 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 DUSP19Q8WTR2 217 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 KAT2AQ92830 837 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 MTBPQ96DY7 904 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 SHCBP1LQ9BZQ2 653 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 HHATLQ9HCP6 504 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 FAM120CQ9NX05 1096 aaKnown RBP16.57■□□□□ 0.24
TPM1-226ENST00000560959 CPSF2Q9P2I0 782 aaKnown RBP16.57■□□□□ 0.24
TPM1-226ENST00000560959 MCTS1Q9ULC4 181 aaKnown RBP16.57■□□□□ 0.24
TPM1-226ENST00000560959 MAGED1Q9Y5V3 778 aaPredicted RBP16.57■□□□□ 0.24
TPM1-226ENST00000560959 IGHV4-39P01824 125 aa16.56■□□□□ 0.24
TPM1-226ENST00000560959 CD3EP07766 207 aa16.56■□□□□ 0.24
TPM1-226ENST00000560959 MPIP34949 423 aa16.56■□□□□ 0.24
TPM1-226ENST00000560959 EIF1AXP47813 144 aaKnown RBP16.56■□□□□ 0.24
TPM1-226ENST00000560959 C17orf67Q0P5P2 114 aa16.56■□□□□ 0.24
TPM1-226ENST00000560959 CTU2Q2VPK5 515 aaKnown RBP16.56■□□□□ 0.24
TPM1-226ENST00000560959 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.56■□□□□ 0.24
TPM1-226ENST00000560959 PTGR2Q8N8N7 351 aaPredicted RBP16.56■□□□□ 0.24
TPM1-226ENST00000560959 OR9A2Q8NGT5 310 aa16.56■□□□□ 0.24
TPM1-226ENST00000560959 HSD17B8Q92506 261 aa16.56■□□□□ 0.24
TPM1-226ENST00000560959 ADGRG7Q96K78 797 aa16.56■□□□□ 0.24
TPM1-226ENST00000560959 PFDN4Q9NQP4 134 aa16.56■□□□□ 0.24
TPM1-226ENST00000560959 MCM8Q9UJA3 840 aa16.56■□□□□ 0.24
TPM1-226ENST00000560959 MRTO4Q9UKD2 239 aaKnown RBP16.56■□□□□ 0.24
TPM1-226ENST00000560959 PCTPQ9UKL6 214 aa16.56■□□□□ 0.24
TPM1-226ENST00000560959 SNX6Q9UNH7 406 aa16.56■□□□□ 0.24
TPM1-226ENST00000560959 CR1P17927 2039 aa16.56■□□□□ 0.24
TPM1-226ENST00000560959 A0A096LPK6 155 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 A0A1W2PP18 115 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 EIF1AYO14602 144 aaKnown RBP16.55■□□□□ 0.24
TPM1-226ENST00000560959 ADAMDEC1O15204 470 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 ADAM11O75078 769 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 COQ9O75208 318 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 PDYNP01213 254 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 CTAGE8P0CG41 777 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 ZNF17P17021 662 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 CDKN1AP38936 164 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 ZNF844Q08AG5 666 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 DECR1Q16698 335 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 SGO1Q5FBB7 561 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 TECRLQ5HYJ1 363 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 C6orf52Q5T4I8 152 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 WDR75Q8IWA0 830 aaKnown RBP16.55■□□□□ 0.24
TPM1-226ENST00000560959 CTAGE4Q8IX94 777 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 C1orf52Q8N6N3 182 aaKnown RBP16.55■□□□□ 0.24
TPM1-226ENST00000560959 OR4F6Q8NGB9 312 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 OR10D3Q8NH80 312 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 FBF1Q8TES7 1133 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 SELENOMQ8WWX9 145 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 PHF21BQ96EK2 531 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 ERP44Q9BS26 406 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 RHNO1Q9BSD3 238 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 RTN4RQ9BZR6 473 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 FARSBQ9NSD9 589 aaKnown RBP16.55■□□□□ 0.24
TPM1-226ENST00000560959 GIMAP4Q9NUV9 329 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 VPS29Q9UBQ0 182 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 CLEC4AQ9UMR7 237 aa16.55■□□□□ 0.24
TPM1-226ENST00000560959 A0A087WV62 115 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 HMX2A2RU54 273 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 ZSCAN12O43309 604 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 NME6O75414 186 aaPredicted RBP16.54■□□□□ 0.24
TPM1-226ENST00000560959 SLITRK5O94991 958 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 SYNGR4O95473 234 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 ESRRBO95718 433 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 IL33O95760 270 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 OTCP00480 354 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 TUBBP07437 444 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 RBP1P09455 135 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 HSD3B1P14060 373 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 HSD3B2P26439 372 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 ADH6P28332 368 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 PSMD4P55036 377 aaKnown RBP16.54■□□□□ 0.24
TPM1-226ENST00000560959 HEPACAMQ14CZ8 416 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 NRF1Q16656 503 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 PGGHGQ32M88 737 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 MROH9Q5TGP6 573 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 OR7G2Q8NG99 324 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 ROBO4Q8WZ75 1007 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 S100PBPQ96BU1 408 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 HS6ST2Q96MM7 605 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 NSUN5Q96P11 429 aaKnown RBP16.54■□□□□ 0.24
TPM1-226ENST00000560959 AMBRA1Q9C0C7 1298 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 SLC35C2Q9NQQ7 365 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 LPAR3Q9UBY5 353 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 NFU1Q9UMS0 254 aa16.54■□□□□ 0.24
TPM1-226ENST00000560959 A0A087WZY1 265 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 FAM187AA6NFU0 413 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 CLOCKO15516 846 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 GCM2O75603 506 aaPredicted RBP16.53■□□□□ 0.24
TPM1-226ENST00000560959 PAFAH1B1P43034 410 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 RAC1P63000 192 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 PRR5P85299 388 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 STX5Q13190 355 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms