RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 PTPMT1Q8WUK0 201 aaPredicted RBP12.69□□□□□ -0.38
HCFC2-202ENST00000544223 PMEPA1Q969W9 287 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 SLC41A2Q96JW4 573 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 NDC1Q9BTX1 674 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 BTBD2Q9BX70 525 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 ZNF350Q9GZX5 532 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 RAB33BQ9H082 229 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 EGLN3Q9H6Z9 239 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 MTHFD2LQ9H903 347 aaPredicted RBP12.69□□□□□ -0.38
HCFC2-202ENST00000544223 CEPT1Q9Y6K0 416 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 IGHV5-10-1A0A0J9YXX1 117 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 AGAP5A6NIR3 686 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 STX11O75558 287 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 BMP10O95393 424 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 HTR2AP28223 471 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 HOXA6P31267 233 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 CNR2P34972 360 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 GPR3P46089 330 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 GPR4P46093 362 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 GPLD1P80108 840 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 RAB39AQ14964 217 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 NR0B2Q15466 257 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 FLYWCH1Q4VC44 716 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 PHF19Q5T6S3 580 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 ARHGAP40Q5TG30 622 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 XAF1Q6GPH4 301 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 CCDC81Q6ZN84 652 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 C16orf47Q6ZP98 133 aaPredicted RBP12.68□□□□□ -0.38
HCFC2-202ENST00000544223 AHSA2Q719I0 299 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 ZNF595Q8IYB9 648 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 SPARTQ8N0X7 666 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 ZNF675Q8TD23 568 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 FAM46AQ96IP4 442 aaKnown RBP12.68□□□□□ -0.38
HCFC2-202ENST00000544223 HRASLS5Q96KN8 279 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 MCHR1Q99705 422 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 GABARAPL3Q9BY60 117 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 PLA2G12AQ9BZM1 189 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 OR10A5Q9H207 317 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 SLC22A11Q9NSA0 550 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 OCIAD1Q9NX40 245 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 ZNF226Q9NYT6 803 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 REV1Q9UBZ9 1251 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 MKL2Q9ULH7 1088 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 SLC7A7Q9UM01 511 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 MRPS33Q9Y291 106 aaKnown RBP12.68□□□□□ -0.38
HCFC2-202ENST00000544223 CNTRLQ7Z7A1 2325 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 MN1Q10571 1320 aaPredicted RBP12.68□□□□□ -0.38
HCFC2-202ENST00000544223 A0A087WV62 115 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 CCDC163A0A0D9SF12 145 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 DPM1O60762 260 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 INMTO95050 263 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 CLPSP04118 112 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 CT45A8P0DMV1 189 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 CT45A9P0DMV2 189 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 ANXA8P13928 327 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 MAP3K8P41279 467 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 ALDH3B2P48448 385 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 EEF1A1P68104 462 aaKnown RBP12.68□□□□□ -0.38
HCFC2-202ENST00000544223 POU6F2P78424 691 aaPredicted RBP12.68□□□□□ -0.38
HCFC2-202ENST00000544223 EPS8Q12929 822 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 GNA13Q14344 377 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 CT45A2Q5DJT8 189 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 CLEC12AQ5QGZ9 265 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 GPR107Q5VW38 600 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 LCN10Q6JVE6 187 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 PWWP2BQ6NUJ5 590 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 WDR88Q6ZMY6 472 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 MAMSTRQ6ZN01 415 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 CLVS1Q8IUQ0 354 aaPredicted RBP12.68□□□□□ -0.38
HCFC2-202ENST00000544223 PEX5LQ8IYB4 626 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 DTWD2Q8NBA8 298 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 MORN4Q8NDC4 146 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 ZNF540Q8NDQ6 660 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 OR4C3Q8NH37 302 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 GRHL3Q8TE85 626 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 RASSF5Q8WWW0 418 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 CNOT9Q92600 299 aaKnown RBP12.68□□□□□ -0.38
HCFC2-202ENST00000544223 HDAC2Q92769 488 aaKnown RBP12.68□□□□□ -0.38
HCFC2-202ENST00000544223 SENP5Q96HI0 755 aaPredicted RBP12.68□□□□□ -0.38
HCFC2-202ENST00000544223 VSTM2LQ96N03 204 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 KLHDC3Q9BQ90 382 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 FUZQ9BT04 418 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 SPATA5L1Q9BVQ7 753 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 TAS2R16Q9NYV7 291 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 ACAD8Q9UKU7 415 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 PCNX3Q9H6A9 2034 aa12.68□□□□□ -0.38
HCFC2-202ENST00000544223 TRIM64A6NGJ6 449 aa12.67□□□□□ -0.38
HCFC2-202ENST00000544223 ADRA2AP08913 450 aa12.67□□□□□ -0.38
HCFC2-202ENST00000544223 HOXB6P17509 224 aaKnown RBP12.67□□□□□ -0.38
HCFC2-202ENST00000544223 C21orf33P30042 268 aaPredicted RBP12.67□□□□□ -0.38
HCFC2-202ENST00000544223 GSTT1P30711 240 aa12.67□□□□□ -0.38
HCFC2-202ENST00000544223 ZNF136P52737 540 aa12.67□□□□□ -0.38
HCFC2-202ENST00000544223 NSDHLQ15738 373 aa12.67□□□□□ -0.38
HCFC2-202ENST00000544223 WDR74Q6RFH5 385 aaPredicted RBP12.67□□□□□ -0.38
HCFC2-202ENST00000544223 PLEKHM3Q6ZWE6 761 aa12.67□□□□□ -0.38
HCFC2-202ENST00000544223 IFI44Q8TCB0 444 aa12.67□□□□□ -0.38
HCFC2-202ENST00000544223 DNAJA3Q96EY1 480 aa12.67□□□□□ -0.38
HCFC2-202ENST00000544223 CCDC74BQ96LY2 380 aa12.67□□□□□ -0.38
HCFC2-202ENST00000544223 GAL3ST4Q96RP7 486 aa12.67□□□□□ -0.38
HCFC2-202ENST00000544223 ARHGDIGQ99819 225 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms