RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 LY6KQ17RY6 165 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 PTCHD3Q3KNS1 767 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 SLC36A2Q495M3 483 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 SYT14P1Q58G82 188 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 MS4A13Q5J8X5 152 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 TCTE1Q5JU00 501 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 ENTPD8Q5MY95 495 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 ATAT1Q5SQI0 421 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 DCST1Q5T197 706 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 FRG2Q64ET8 278 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 WSCD1Q658N2 575 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 SLC30A6Q6NXT4 461 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 CDC73Q6P1J9 531 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 USP50Q70EL3 339 aaPredicted RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 CHMP1BQ7LBR1 199 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 NLRC3Q7RTR2 1065 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 MON1AQ86VX9 555 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 METTL23Q86XA0 190 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 KLHDC8AQ8IYD2 350 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 GPR65Q8IYL9 337 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 SLC44A3Q8N4M1 653 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 KLHL36Q8N4N3 616 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 SYT14Q8NB59 555 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 POGLUT1Q8NBL1 392 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 HJURPQ8NCD3 748 aaPredicted RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 DMBX1Q8NFW5 382 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 OR10Q1Q8NGQ4 319 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 OR6K3Q8NGY3 331 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 MOSPD2Q8NHP6 518 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 PPTC7Q8NI37 304 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 SLC7A13Q8TCU3 470 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 TRAPPC12Q8WVT3 735 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 PHYHIPQ92561 330 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 FAM168AQ92567 244 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 SGK3Q96BR1 496 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 PCED1BQ96HM7 432 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 CCDC74BQ96LY2 380 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 TSSK3Q96PN8 268 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 FRG2BQ96QU4 278 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 EGFL8Q99944 293 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 FAIM2Q9BWQ8 316 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 GPR63Q9BZJ6 419 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 NKX6-2Q9C056 277 aaPredicted RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 SPRTNQ9H040 489 aaPredicted RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 PIGMQ9H3S5 423 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 LRRN3Q9H3W5 708 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 SAV1Q9H4B6 383 aaPredicted RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 MTG2Q9H4K7 406 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 ZCCHC4Q9H5U6 513 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 NSUN3Q9H649 340 aaKnown RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 C11orf49Q9H6J7 331 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 UCK1Q9HA47 277 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 NMUR1Q9HB89 426 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 INPP5EQ9NRR6 644 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 TMEM184CQ9NVA4 438 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 BABAM2Q9NXR7 383 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 RPS6KB2Q9UBS0 482 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 MALT1Q9UDY8 824 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 RGS17Q9UGC6 210 aaPredicted RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 EXO1Q9UQ84 846 aaKnown RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 EXOGQ9Y2C4 368 aaKnown RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 DTX4Q9Y2E6 619 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 MRPS7Q9Y2R9 242 aaKnown RBP6.29□□□□□ -1.4
USP28-207ENST00000538475 CASP8AP2Q9UKL3 1982 aa6.29□□□□□ -1.4
USP28-207ENST00000538475 DNAJC25-GNG10A0A024R161 153 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 A0A0D9SG52 128 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 SMIM35A0A1B0GVV1 85 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 A0A1W2PRQ8 180 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 OR2M5A3KFT3 312 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 MTMR11A4FU01 709 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 ARHGEF33A8MVX0 844 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 G3V3Q6 166 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 GABRPO00591 440 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 CCL22O00626 93 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 IMPA2O14732 288 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 FFAR3O14843 346 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 INSIG1O15503 277 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 GPR42O15529 346 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 HCRTO43612 131 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 CPSF4O95639 269 aaKnown RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 HIST1H2ABP04908 130 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 H1F0P07305 194 aaKnown RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 RPA2P15927 270 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 LAG3P18627 525 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 CXCL3P19876 107 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 PSMB1P20618 241 aaKnown RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 RPS12P25398 132 aaKnown RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 AGTR1P30556 359 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 CCR7P32248 378 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 CHI3L1P36222 383 aaPredicted RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 ETV5P41161 510 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 MAPK9P45984 424 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 MTNR1AP48039 350 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 SLC6A12P48065 614 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 GIPRP48546 466 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 STARP49675 285 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 DLX5P56178 289 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 CTBP2P56545 445 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 TAS2R43P59537 309 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 SEC61A1P61619 476 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms