RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 LYPD4Q6UWN0 246 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 C16orf62Q7Z3J2 963 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 CRIPAKQ8N1N5 446 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 TOMM5Q8N4H5 51 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 HAVCR2Q8TDQ0 301 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 XAGE5Q8WWM1 108 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 DIO2Q92813 273 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 B3GNT4Q9C0J1 378 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 IL21Q9HBE4 155 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 INPP5EQ9NRR6 644 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 LRFN2Q9ULH4 789 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 RASD1Q9Y272 281 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 NPFFR2Q9Y5X5 522 aa16.63■□□□□ 0.25
NUP54-205ENST00000507257 CTDSPLO15194 276 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 GSTZ1O43708 216 aaPredicted RBP16.62■□□□□ 0.25
NUP54-205ENST00000507257 FZD7O75084 574 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 FGBP02675 491 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 SERPIND1P05546 499 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 CAPZA2P47755 286 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 TAS2R41P59536 307 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 ST3GAL2Q16842 350 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 TXNDC8Q6A555 127 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 FAM180BQ6P0A1 224 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 DPPA4Q7L190 304 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 NRSN1Q8IZ57 195 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 ACBD7Q8N6N7 88 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 SFXN5Q8TD22 340 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 LCORQ96JN0 433 aaPredicted RBP16.62■□□□□ 0.25
NUP54-205ENST00000507257 ABCG4Q9H172 646 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 PELI2Q9HAT8 420 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 TRIM36Q9NQ86 728 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 RGS17Q9UGC6 210 aaPredicted RBP16.62■□□□□ 0.25
NUP54-205ENST00000507257 DENND4CQ5VZ89 1909 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 A0A1W2PPL8 197 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 ANKRD61A6NGH8 418 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 G3V3Q6 166 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 PLPP2O43688 288 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 PRAF2O60831 178 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 WEE1P30291 646 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 EPHA5P54756 1037 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 TSTA3Q13630 321 aaPredicted RBP16.62■□□□□ 0.25
NUP54-205ENST00000507257 DECR1Q16698 335 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 KIAA1161Q6NSJ0 714 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 KRT74Q7RTS7 529 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 NUDT13Q86X67 352 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 MS4A15Q8N5U1 240 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 SRFBP1Q8NEF9 429 aaKnown RBP16.62■□□□□ 0.25
NUP54-205ENST00000507257 OR2A12Q8NGT7 310 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 OR2T4Q8NH00 348 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 TRMT10AQ8TBZ6 339 aaKnown RBP16.62■□□□□ 0.25
NUP54-205ENST00000507257 FAIM2Q9BWQ8 316 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 PITHD1Q9GZP4 211 aaPredicted RBP16.62■□□□□ 0.25
NUP54-205ENST00000507257 FN3KQ9H479 309 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 ZNF334Q9HCZ1 680 aaPredicted RBP16.62■□□□□ 0.25
NUP54-205ENST00000507257 KCMF1Q9P0J7 381 aa16.62■□□□□ 0.25
NUP54-205ENST00000507257 H2AFY2Q9P0M6 372 aaPredicted RBP16.62■□□□□ 0.25
NUP54-205ENST00000507257 KIAA1549LQ6ZVL6 1849 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 M0R233 179 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 LILRB5O75023 590 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 SC5DO75845 299 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 TGM6O95932 706 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 CHRM4P08173 479 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 GIFP27352 417 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 CTGFP29279 349 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 EPHB3P54753 998 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 GARNL3Q5VVW2 1013 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 ZNF620Q6ZNG0 422 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 Q6ZVU0 165 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 PXKQ7Z7A4 578 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 PIAS4Q8N2W9 510 aaPredicted RBP16.61■□□□□ 0.25
NUP54-205ENST00000507257 GIMAP1Q8WWP7 306 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 ACOT11Q8WXI4 607 aaPredicted RBP16.61■□□□□ 0.25
NUP54-205ENST00000507257 LINC00615Q96LM1 132 aaPredicted RBP16.61■□□□□ 0.25
NUP54-205ENST00000507257 VN1R3Q9BXE9 311 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 MFRPQ9BY79 579 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 ZNF436Q9C0F3 470 aaPredicted RBP16.61■□□□□ 0.25
NUP54-205ENST00000507257 DPEP2Q9H4A9 486 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 DDX31Q9H8H2 851 aaKnown RBP16.61■□□□□ 0.25
NUP54-205ENST00000507257 CFAP97Q9P2B7 532 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 GLS2Q9UI32 602 aa16.61■□□□□ 0.25
NUP54-205ENST00000507257 hCG_1807616A0A1W2PRN6 198 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 MANSC4A6NHS7 340 aaPredicted RBP16.6■□□□□ 0.25
NUP54-205ENST00000507257 SERPINI2O75830 405 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 GNSP15586 552 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 TIMP2P16035 220 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 SHC1P29353 583 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 LCN1P31025 176 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 BUD31P41223 144 aaPredicted RBP16.6■□□□□ 0.25
NUP54-205ENST00000507257 TAS2R43P59537 309 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 FUT5Q11128 374 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 NHLRC3Q5JS37 347 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 SLC30A6Q6NXT4 461 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 B3GLCTQ6Y288 498 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 ADCK2Q7Z695 626 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 SIAH3Q8IW03 269 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 SIRT6Q8N6T7 355 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 OR5D16Q8NGK9 328 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 RPLP0P6Q8NHW5 317 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 CXorf40AQ8TE69 158 aa16.6■□□□□ 0.25
NUP54-205ENST00000507257 EXOSC8Q96B26 276 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms