RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 GLYATL1P3A0A0U1RQE8 302 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 SAGE2PA6NJ88 616 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 MAGEB17A8MXT2 336 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 M0R3H8 397 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC31A1O15431 190 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 GALR2O43603 387 aaPredicted RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 LCMT2O60294 686 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ABCB7O75027 752 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 RPP14O95059 124 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 GADD45GO95257 159 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 CLDN9O95484 217 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 OPN1LWP04000 364 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ELFN1P0C7U0 828 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF865P0CJ78 1059 aaPredicted RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 G6PDP11413 515 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 CTSEP14091 401 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TSHRP16473 764 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 S100PP25815 95 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 CORO1AP31146 461 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 CAPZBP47756 277 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 GLUD2P49448 558 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 EVX1P49640 407 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 AGTR2P50052 363 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 CTSCP53634 463 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 GMFBP60983 142 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ERVS71-1P61550 626 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 DCAF7P61962 342 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 RPS14P62263 151 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 HERVK_113P63132 956 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 PMP22Q01453 160 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 CAMK1Q14012 370 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TSTQ16762 297 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 LRRC37A5PQ49AS3 106 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 BCL7AQ4VC05 210 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TPRG1LQ5T0D9 272 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 MSANTD2Q6P1R3 559 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 RNF165Q6ZSG1 346 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 LINGO2Q7L985 606 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 PRSS48Q7RTY5 328 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 NRARPQ7Z6K4 114 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TECPR1Q7Z6L1 1165 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 PEG10Q86TG7 708 aaKnown RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 C17orf64Q86WR6 236 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 FAM129CQ86XR2 697 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TCEAL8Q8IYN2 117 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 RDH10Q8IZV5 341 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 CXorf40BQ96DE9 158 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 CXorf58Q96LI9 332 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TGM7Q96PF1 710 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF607Q96SK3 696 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TEAD3Q99594 435 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 ATG101Q9BSB4 218 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 TMED9Q9BVK6 235 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 DNAJC27Q9NZQ0 273 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 STOX2Q9P2F5 926 aaPredicted RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 MLXQ9UH92 298 aa3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 COLQQ9Y215 455 aaPredicted RBP3.47□□□□□ -1.85
PCDH11X-208ENST00000504220 NUP214P35658 2090 aaPredicted RBP3.46□□□□□ -1.85
PCDH11X-208ENST00000504220 FNDC1Q4ZHG4 1894 aaPredicted RBP3.46□□□□□ -1.85
PCDH11X-208ENST00000504220 FXYD6-FXYD2A0A087WZ82 144 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 XKRY2A2RUG3 117 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 LGALS8O00214 317 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CLIC1O00299 241 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TLX2O43763 284 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 MSCO60682 206 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 C6orf47O95873 294 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PPBPP02775 128 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 NBEAP1P0C6P0 100 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC35G4P0C7Q5 338 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CBSLP0DN79 551 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 FOLR2P14207 255 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TLX1P31314 330 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 AKT2P31751 481 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 GKP32189 559 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CBSP35520 551 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 BTG2P78543 158 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 E2F1Q01094 437 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 GLO1Q04760 184 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 SKP2Q13309 424 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 GAB1Q13480 694 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CBFBQ13951 182 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CEACAM7Q14002 265 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PTGR1Q14914 329 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 POU4F3Q15319 338 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 HYAL4Q2M3T9 481 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ALG11Q2TAA5 492 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PIGGQ5H8A4 983 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 CRB2Q5IJ48 1285 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ELP2Q6IA86 826 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 FAM220AQ7Z4H9 259 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TMED4Q7Z7H5 227 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 COMMD7Q86VX2 200 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 TMEM86AQ8N2M4 240 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ARL14EPQ8N8R7 260 aaPredicted RBP3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ZFP41Q8N8Y5 198 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 OR4K1Q8NGD4 311 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 PPTC7Q8NI37 304 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 ELP5Q8TE02 316 aa3.46□□□□□ -1.86
PCDH11X-208ENST00000504220 FBLIM1Q8WUP2 373 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms