RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 TGFBR3LH3BV60 316 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 TBX1O43435 398 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 OSMP13725 252 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 NT5EP21589 574 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 SOX6P35712 828 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 AVPR1BP47901 424 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 SNRPGP62308 76 aaKnown RBP13.48□□□□□ -0.25
CHD3-211ENST00000481999 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHD3-211ENST00000481999 CD300CQ08708 224 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 SOWAHCQ53LP3 525 aaPredicted RBP13.48□□□□□ -0.25
CHD3-211ENST00000481999 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.48□□□□□ -0.25
CHD3-211ENST00000481999 MFSD12Q6NUT3 480 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 C11orf74Q86VG3 221 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 MCATQ8IVS2 390 aaKnown RBP13.48□□□□□ -0.25
CHD3-211ENST00000481999 OR56A1Q8NGH5 318 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 TMEM131Q92545 1883 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 Q96MT0 163 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 ROGDIQ9GZN7 287 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 INIPQ9NRY2 104 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 TAS2R16Q9NYV7 291 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 CFL2Q9Y281 166 aa13.48□□□□□ -0.25
CHD3-211ENST00000481999 URADA6NGE7 173 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 CCRL2O00421 344 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 SLC15A1P46059 708 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 CAPZBP47756 277 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 SNAP47Q5SQN1 464 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 C16orf62Q7Z3J2 963 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 WDR36Q8NI36 951 aaKnown RBP13.47□□□□□ -0.25
CHD3-211ENST00000481999 ZFPM2Q8WW38 1151 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 RASSF5Q8WWW0 418 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 PEX11GQ96HA9 241 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 OR5M11Q96RB7 305 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 RNF167Q9H6Y7 350 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 MUTYHQ9UIF7 546 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 PHF11Q9UIL8 331 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 TP53BP1Q12888 1972 aaPredicted RBP13.47□□□□□ -0.25
CHD3-211ENST00000481999 PNMA8CA0A1B0GUJ8 204 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 K7ESF4 209 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 FAAHO00519 579 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 OR10H3O60404 316 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 PROS1P07225 676 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 TMED10P49755 219 aaKnown RBP13.47□□□□□ -0.25
CHD3-211ENST00000481999 SEPHS1P49903 392 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 ARFIP1P53367 373 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 SLC13A2Q13183 592 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 ILKQ13418 452 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 TSTQ16762 297 aaKnown RBP13.47□□□□□ -0.25
CHD3-211ENST00000481999 AMZ1Q400G9 498 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 DCST1Q5T197 706 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 STEAP3Q658P3 488 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 ARHGEF39Q8N4T4 335 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 SFXN5Q8TD22 340 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 ADAMTS15Q8TE58 950 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 GPA33Q99795 319 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 CHRDQ9H2X0 955 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 C3orf14Q9HBI5 128 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 MAN2C1Q9NTJ4 1040 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 REV1Q9UBZ9 1251 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 NDOR1Q9UHB4 597 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 MAU2Q9Y6X3 613 aa13.47□□□□□ -0.25
CHD3-211ENST00000481999 ASCC3Q8N3C0 2202 aaKnown RBP13.46□□□□□ -0.25
CHD3-211ENST00000481999 ASPMQ8IZT6 3477 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 A0A1B0GVT2 93 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 FAM221BA6H8Z2 402 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 FOXS1O43638 330 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 H1F0P07305 194 aaKnown RBP13.46□□□□□ -0.25
CHD3-211ENST00000481999 ACP2P11117 423 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 TLX1P31314 330 aaPredicted RBP13.46□□□□□ -0.25
CHD3-211ENST00000481999 TRHRP34981 398 aaPredicted RBP13.46□□□□□ -0.25
CHD3-211ENST00000481999 MAGEA8P43361 318 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 FASLGP48023 281 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 NXPH1P58417 271 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 SMIM11AP58511 58 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 BTG2P78543 158 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 ZNF628Q5EBL2 1059 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 ZNF311Q5JNZ3 666 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 SLX4IPQ5VYV7 408 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 USP53Q70EK8 1073 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 ATCAYQ86WG3 371 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 OR2L13Q8N349 312 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 SPEM1Q8N4L4 309 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 PARP16Q8N5Y8 322 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 POC5Q8NA72 575 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 HPS1Q92902 700 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 DHRS1Q96LJ7 313 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 ACTRT3Q9BYD9 372 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 SLC25A19Q9HC21 320 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 C11orf16Q9NQ32 467 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 SOHLH2Q9NX45 425 aa13.46□□□□□ -0.25
CHD3-211ENST00000481999 CPSF4LA6NMK7 179 aaKnown RBP13.46□□□□□ -0.26
CHD3-211ENST00000481999 CHST10O43529 356 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 KIAA0513O60268 411 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 ENTPD6O75354 484 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 PTTG1O95997 202 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 OR1D5P58170 312 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 RHAGQ02094 409 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 KRR1Q13601 381 aaKnown RBP13.46□□□□□ -0.26
CHD3-211ENST00000481999 GPR68Q15743 365 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 NNATQ16517 81 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms