RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 DRICH1Q6PGQ1 229 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-203ENST00000467533 THSD4Q6ZMP0 1018 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 NUFIP2Q7Z417 695 aaKnown RBP9.04□□□□□ -0.96
HDAC3-203ENST00000467533 GTF2IRD2Q86UP8 949 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 NUDT13Q86X67 352 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 TDRPQ86YL5 185 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 WDR75Q8IWA0 830 aaKnown RBP9.04□□□□□ -0.96
HDAC3-203ENST00000467533 CNTN4Q8IWV2 1026 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 TXLNBQ8N3L3 684 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 ZNF540Q8NDQ6 660 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 HUS1BQ8NHY5 278 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 RNF138Q8WVD3 245 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 EFHD2Q96C19 240 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-203ENST00000467533 JMJD8Q96S16 334 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 MTERF1Q99551 399 aaKnown RBP9.04□□□□□ -0.96
HDAC3-203ENST00000467533 ZNF717Q9BY31 904 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-203ENST00000467533 MYOZ1Q9NP98 299 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-203ENST00000467533 PPANQ9NQ55 473 aaKnown RBP9.04□□□□□ -0.96
HDAC3-203ENST00000467533 SDHAF3Q9NRP4 125 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 PLCE1Q9P212 2302 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 GOLGA8QA0A0J9YX86 632 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 GOLGA8OA6NCC3 632 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 GOLGA6L10A6NI86 522 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 GOLGA8NF8WBI6 632 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 GOLGA8RI6L899 631 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 CBX7O95931 251 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 OPN1LWP04000 364 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 BSGP35613 385 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 GGT5P36269 586 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 ZNF83P51522 516 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 ARFIP1P53367 373 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 PNLIPRP2P54317 469 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 DVL1P1P54792 670 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-203ENST00000467533 CDH15P55291 814 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 PHEXP78562 749 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 MRPS22P82650 360 aaKnown RBP9.03□□□□□ -0.96
HDAC3-203ENST00000467533 MAP4K2Q12851 820 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 GLYR1Q49A26 553 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-203ENST00000467533 HBMQ6B0K9 141 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 SSX8Q7RTT4 187 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 LRRC70Q7Z2Q7 622 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 GALNT7Q86SF2 657 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 MYLK4Q86YV6 388 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-203ENST00000467533 MCUQ8NE86 351 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 OR2V1Q8NHB1 315 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 ABHD3Q8WU67 409 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 MTBPQ96DY7 904 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 CERS2Q96G23 380 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 REXO5Q96IC2 774 aaKnown RBP9.03□□□□□ -0.96
HDAC3-203ENST00000467533 ADGRG7Q96K78 797 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 SIGLEC10Q96LC7 697 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 INPP5KQ9BT40 448 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 DDX31Q9H8H2 851 aaKnown RBP9.03□□□□□ -0.96
HDAC3-203ENST00000467533 KLHL13Q9P2N7 655 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 ZNF639Q9UID6 485 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 VDAC3Q9Y277 283 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 GPR55Q9Y2T6 319 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-203ENST00000467533 REXO2Q9Y3B8 237 aaKnown RBP9.03□□□□□ -0.96
HDAC3-203ENST00000467533 ATP23Q9Y6H3 246 aa9.03□□□□□ -0.96
HDAC3-203ENST00000467533 PCNX3Q9H6A9 2034 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 NPIPA5A0A0B4J1W7 369 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 NPIPA7E9PJI5 369 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 NDUFB5O43674 189 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 ERAL1O75616 437 aaKnown RBP9.02□□□□□ -0.97
HDAC3-203ENST00000467533 SNUPNO95149 360 aaKnown RBP9.02□□□□□ -0.97
HDAC3-203ENST00000467533 S100BP04271 92 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-203ENST00000467533 ATP1B1P05026 303 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 PABPC4LP0CB38 370 aaKnown RBP9.02□□□□□ -0.97
HDAC3-203ENST00000467533 NPIPA8P0DM63 369 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 ZNF17P17021 662 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 PTAFRP25105 342 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 FEN1P39748 380 aaKnown RBP9.02□□□□□ -0.97
HDAC3-203ENST00000467533 PIK3CBP42338 1070 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 MAGEA3P43357 314 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 EMDP50402 254 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 CORO7P57737 925 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 GPX6P59796 221 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 MRPS35P82673 323 aaKnown RBP9.02□□□□□ -0.97
HDAC3-203ENST00000467533 MGAT2Q10469 447 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 FOXL1Q12952 345 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 TBX2Q13207 712 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-203ENST00000467533 LTB4RQ15722 352 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 TRMT12Q53H54 448 aaKnown RBP9.02□□□□□ -0.97
HDAC3-203ENST00000467533 TIMM23BQ5SRD1 257 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 PDSS1Q5T2R2 415 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 SULT1C3Q6IMI6 304 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 GRHL2Q6ISB3 625 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 KLHL17Q6TDP4 642 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 USP43Q70EL4 1123 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 GLCCI1Q86VQ1 547 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 TUSC5Q8IXB3 177 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 SVOPLQ8N434 492 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 TRIM58Q8NG06 486 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 UHMK1Q8TAS1 419 aaKnown RBP9.02□□□□□ -0.97
HDAC3-203ENST00000467533 RNF128Q8TEB7 428 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 ANKRD49Q8WVL7 239 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 HPS1Q92902 700 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 EXT2Q93063 718 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 FBXO17Q96EF6 278 aa9.02□□□□□ -0.97
HDAC3-203ENST00000467533 SNX18Q96RF0 628 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms