RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 OMA1Q96E52 524 aa13.21□□□□□ -0.29
COL6A1-202ENST00000463060 TCRBV3S1A0A5B6 114 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 OR6C70A6NIJ9 312 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 ARGFXA6NJG6 315 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 AQP12BA6NM10 295 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 A8MUI8 341 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 REM1O75628 298 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 PPM1BO75688 479 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 UGT2B17O75795 530 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 NGFRP08138 427 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 CYP4B1P13584 511 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 CD247P20963 164 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 AQP1P29972 269 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 ATP12AP54707 1039 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 NRG3P56975 720 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 DMTNQ08495 405 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 PLCXD2Q0VAA5 305 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 FLOT2Q14254 428 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 KPNB1Q14974 876 aaKnown RBP13.2□□□□□ -0.3
COL6A1-202ENST00000463060 KLHL26Q53HC5 615 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 MTX3Q5HYI7 312 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 C1orf146Q5VVC0 180 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 B3GNTL1Q67FW5 361 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-202ENST00000463060 DESI1Q6ICB0 168 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 CYP2R1Q6VVX0 501 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 CBLL1Q75N03 491 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 EIF3MQ7L2H7 374 aaKnown RBP13.2□□□□□ -0.3
COL6A1-202ENST00000463060 AQP12AQ8IXF9 295 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 EID3Q8N140 333 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 ZNF619Q8N2I2 560 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 GALNT16Q8N428 558 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 SLC5A8Q8N695 610 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 SIRT6Q8N6T7 355 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 GOLM1Q8NBJ4 401 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 GPR32P1Q8NGA4 272 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 OIT3Q8WWZ8 545 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 EFHD2Q96C19 240 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-202ENST00000463060 NSMCE2Q96MF7 247 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 COL21A1Q96P44 957 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 ZNF607Q96SK3 696 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 ADOQ96SZ5 270 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 QRSL1Q9H0R6 528 aaKnown RBP13.2□□□□□ -0.3
COL6A1-202ENST00000463060 ING2Q9H160 280 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 WDR70Q9NW82 654 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 MRTO4Q9UKD2 239 aaKnown RBP13.2□□□□□ -0.3
COL6A1-202ENST00000463060 RAXQ9Y2V3 346 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 CHST2Q9Y4C5 530 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 KCNMB2Q9Y691 235 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 EXPH5Q8NEV8 1989 aa13.2□□□□□ -0.3
COL6A1-202ENST00000463060 CELSR3Q9NYQ7 3312 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 A0A087WV48 116 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 K7ENP7 123 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 RRP8O43159 456 aaKnown RBP13.19□□□□□ -0.3
COL6A1-202ENST00000463060 FADS1O60427 444 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 TPST1O60507 370 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 UGT2B11O75310 529 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 GMNNO75496 209 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 CIB2O75838 187 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 CEACAM4O75871 244 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 PDE9AO76083 593 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 UTS2O95399 124 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 EPPINO95925 133 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 SERPINA1P01009 418 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 PABPC4LP0CB38 370 aaKnown RBP13.19□□□□□ -0.3
COL6A1-202ENST00000463060 TBXA2RP21731 343 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 KCNJ5P48544 419 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 PSMD4P55036 377 aaKnown RBP13.19□□□□□ -0.3
COL6A1-202ENST00000463060 SELENOWP63302 87 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 GPR68Q15743 365 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 NTRK2Q16620 822 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 MEP1AQ16819 746 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 DUSP7Q16829 419 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 DEFB109BQ30KR1 87 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 FLYWCH1Q4VC44 716 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 CYBRD1Q53TN4 286 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 INO80CQ6PI98 192 aaPredicted RBP13.19□□□□□ -0.3
COL6A1-202ENST00000463060 OPN5Q6U736 354 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 UNQ6494/PRO21346Q6UXR6 183 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 APOOLQ6UXV4 268 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 CCDC81Q6ZN84 652 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 NUP54Q7Z3B4 507 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 KRT73Q86Y46 540 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 FAM86B1Q8N7N1 296 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 BHLHE22Q8NFJ8 381 aaPredicted RBP13.19□□□□□ -0.3
COL6A1-202ENST00000463060 SLC22A8Q8TCC7 542 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 SNRNP27Q8WVK2 155 aaKnown RBP13.19□□□□□ -0.3
COL6A1-202ENST00000463060 APOBEC4Q8WW27 367 aaKnown RBP13.19□□□□□ -0.3
COL6A1-202ENST00000463060 FAM162AQ96A26 154 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 DUS3LQ96G46 650 aaKnown RBP13.19□□□□□ -0.3
COL6A1-202ENST00000463060 ZNF354BQ96LW1 612 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 HOXD1Q9GZZ0 328 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 TRIM45Q9H8W5 580 aaPredicted RBP13.19□□□□□ -0.3
COL6A1-202ENST00000463060 ZBTB20Q9HC78 741 aaPredicted RBP13.19□□□□□ -0.3
COL6A1-202ENST00000463060 UBQLN4Q9NRR5 601 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 FLRT3Q9NZU0 649 aa13.19□□□□□ -0.3
COL6A1-202ENST00000463060 NPIPA5A0A0B4J1W7 369 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 NPIPA7E9PJI5 369 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 CDK2AP1O14519 115 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 ABCB7O75027 752 aa13.18□□□□□ -0.3
COL6A1-202ENST00000463060 SERPINB7O75635 380 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms