RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PAIP1Q9H074 479 aaKnown RBP25.58■■□□□ 1.69
SMARCC1-203ENST00000454240 ZNF703Q9H7S9 590 aaPredicted RBP25.58■■□□□ 1.69
SMARCC1-203ENST00000454240 MRGBPQ9NV56 204 aa25.58■■□□□ 1.69
SMARCC1-203ENST00000454240 GTF3C1Q12789 2109 aa25.58■■□□□ 1.69
SMARCC1-203ENST00000454240 A0A1W2PP18 115 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 SNPHO15079 494 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 UNC5CO95185 931 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 ANP32DO95626 131 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 HOXB9P17482 250 aaPredicted RBP25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 MAGEA5P43359 124 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 MASP1P48740 699 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 C6orf10Q5SRN2 563 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 DCST2Q5T1A1 773 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 GFRALQ6UXV0 394 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 DNAJC14Q6Y2X3 702 aaPredicted RBP25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 RNF130Q86XS8 419 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 CHDHQ8NE62 594 aaPredicted RBP25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 TSPEARQ8WU66 669 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 GNRHR2Q96P88 292 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 SAR1AQ9NR31 198 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 PLSCR2Q9NRY7 297 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 WIF1Q9Y5W5 379 aa25.57■■□□□ 1.68
SMARCC1-203ENST00000454240 ZNF407Q9C0G0 2248 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 A0A096LPI6 279 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 GMNCA6NCL1 334 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 KRT75O95678 551 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 AGR2O95994 175 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 OR12D1P0DN82 309 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 ELAVL4P26378 380 aaKnown RBP25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 GNGT1P63211 74 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 ELOAQ14241 798 aaKnown RBP25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 GRAMD1BQ3KR37 738 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 GTDC1Q4AE62 458 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 PAGE3Q5JUK9 113 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 HEPHL1Q6MZM0 1159 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 TNFAIP8L2Q6P589 184 aaPredicted RBP25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 ANGPTL8Q6UXH0 198 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 GHDCQ8N2G8 530 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 WDSUB1Q8N9V3 476 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 OR1J4Q8NGS1 313 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 OR4C3Q8NH37 302 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 SDF2Q99470 211 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 DEFB127Q9H1M4 99 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 UBQLN3Q9H347 655 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 QPCTLQ9NXS2 382 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 PCDHB14Q9Y5E9 798 aa25.56■■□□□ 1.68
SMARCC1-203ENST00000454240 GNB5O14775 395 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 AK1P00568 194 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 NGFRP08138 427 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 TBXA2RP21731 343 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 DRD4P21917 467 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 KHKP50053 298 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 TXNL4AP83876 142 aaKnown RBP25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 SLC10A1Q14973 349 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 ARHGAP11BQ3KRB8 267 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 LRIF1Q5T3J3 769 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 APOOLQ6UXV4 268 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 ELAC2Q9BQ52 826 aaKnown RBP25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 RTN4RQ9BZR6 473 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 TPT1P8Q9HAU6 139 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 EXD2Q9NVH0 621 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 B4GALT7Q9UBV7 327 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 C15orf41Q9Y2V0 281 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 HRH3Q9Y5N1 445 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 DNAJC13O75165 2243 aa25.55■■□□□ 1.68
SMARCC1-203ENST00000454240 PCNX3Q9H6A9 2034 aa25.54■■□□□ 1.68
SMARCC1-203ENST00000454240 IGHG3P01860 377 aa25.54■■□□□ 1.68
SMARCC1-203ENST00000454240 CELA3AP09093 270 aa25.54■■□□□ 1.68
SMARCC1-203ENST00000454240 MAGEA8P43361 318 aa25.54■■□□□ 1.68
SMARCC1-203ENST00000454240 CLK3P49761 638 aaKnown RBP25.54■■□□□ 1.68
SMARCC1-203ENST00000454240 MVDP53602 400 aa25.54■■□□□ 1.68
SMARCC1-203ENST00000454240 SPATA21Q7Z572 469 aa25.54■■□□□ 1.68
SMARCC1-203ENST00000454240 CHERPQ8IWX8 916 aaKnown RBP25.54■■□□□ 1.68
SMARCC1-203ENST00000454240 XAGE5Q8WWM1 108 aa25.54■■□□□ 1.68
SMARCC1-203ENST00000454240 RAB8BQ92930 207 aa25.54■■□□□ 1.68
SMARCC1-203ENST00000454240 UBQLN4Q9NRR5 601 aa25.54■■□□□ 1.68
SMARCC1-203ENST00000454240 SLAMF8Q9P0V8 285 aa25.54■■□□□ 1.68
SMARCC1-203ENST00000454240 POLEQ07864 2286 aa25.54■■□□□ 1.68
SMARCC1-203ENST00000454240 UBR5O95071 2799 aaPredicted RBP25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 ALG1L2C9J202 215 aa25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 HMGN4O00479 90 aa25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 SCO2O43819 266 aa25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 OXSR1O95747 527 aaPredicted RBP25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 SNRPB2P08579 225 aaKnown RBP25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 ATP6V1C1P21283 382 aa25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 HSF1Q00613 529 aa25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 UBAP2LQ14157 1087 aaKnown RBP25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 EIF2S3LQ2VIR3 472 aaKnown RBP25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 COX20Q5RI15 118 aa25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 AP1ARQ63HQ0 302 aa25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 MARCH3Q86UD3 253 aa25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 PLCZ1Q86YW0 608 aa25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 PNPT1Q8TCS8 783 aaKnown RBP25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 ACKR4Q9NPB9 350 aa25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 SDHAF3Q9NRP4 125 aa25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 SLC25A37Q9NYZ2 338 aa25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 LEF1Q9UJU2 399 aaPredicted RBP25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 NDUFAF1Q9Y375 327 aa25.53■■□□□ 1.68
SMARCC1-203ENST00000454240 CDC40O60508 579 aaKnown RBP eCLIP25.52■■□□□ 1.68
SMARCC1-203ENST00000454240 CBR3O75828 277 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms