RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 PEX1O43933 1283 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 SMPD2O60906 423 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 GUCY1B2O75343 617 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 ERN1O75460 977 aaKnown RBP9.24□□□□□ -0.93
ATG4B-212ENST00000430617 NPPAP01160 153 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 IFNA2P01563 188 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 HRGP04196 525 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 NQO1P15559 274 aaKnown RBP9.24□□□□□ -0.93
ATG4B-212ENST00000430617 SLC6A2P23975 617 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 PEX19P40855 299 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 CYB561P49447 251 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 GPR85P60893 370 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 PSME3P61289 254 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 SKP1P63208 163 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 RUNX1T1Q06455 604 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 LRRC74AQ0VAA2 488 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 CAPRIN1Q14444 709 aaKnown RBP9.24□□□□□ -0.93
ATG4B-212ENST00000430617 ANXA8L1Q5VT79 327 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 OR52E8Q6IFG1 317 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 PGM2L1Q6PCE3 622 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 PRSS57Q6UWY2 283 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 ANKRD37Q7Z713 158 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 ANKRD46Q86W74 232 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 SLC5A8Q8N695 610 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 TMEM52Q8NDY8 209 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 M1APQ8TC57 530 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 METTL21AQ8WXB1 218 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 LRRC58Q96CX6 371 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 PERPQ96FX8 193 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 ITCHQ96J02 903 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 PRPF18Q99633 342 aaKnown RBP9.24□□□□□ -0.93
ATG4B-212ENST00000430617 CPPED1Q9BRF8 314 aaPredicted RBP9.24□□□□□ -0.93
ATG4B-212ENST00000430617 MMADHCQ9H3L0 296 aaPredicted RBP9.24□□□□□ -0.93
ATG4B-212ENST00000430617 RMND5AQ9H871 391 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 TRIM45Q9H8W5 580 aaPredicted RBP9.24□□□□□ -0.93
ATG4B-212ENST00000430617 CLK4Q9HAZ1 481 aaKnown RBP9.24□□□□□ -0.93
ATG4B-212ENST00000430617 MS4A12Q9NXJ0 267 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 VAPAQ9P0L0 249 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 LIPGQ9Y5X9 500 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 GMEB1Q9Y692 573 aa9.24□□□□□ -0.93
ATG4B-212ENST00000430617 MED12LQ86YW9 2145 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 C15orf38-AP3S2A0A0A6YYH1 394 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 PRSS51A0A1B0GVH4 220 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 A0A1W2PS29 197 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 PINLYPA6NC86 204 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 MBD3L4A6NDZ8 208 aaPredicted RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 TUBAL3A6NHL2 446 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 MBD3L5A6NJ08 208 aaPredicted RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 NME4O00746 187 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 PGRMC2O15173 223 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 KCNH1O95259 989 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 CNOT4O95628 575 aaKnown RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 ZCCHC18P0CG32 403 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 DDX5P17844 614 aaKnown RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 BMP7P18075 431 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 EFNA1P20827 205 aaPredicted RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 CPN2P22792 545 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 BUD31P41223 144 aaPredicted RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 TRPC1P48995 793 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 ALDH9A1P49189 494 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 SLC7A2P52569 658 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 CORO7P57737 925 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 DUSP2Q05923 314 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 SELPLGQ14242 412 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 MLC1Q15049 377 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 GLIPR1L2Q4G1C9 344 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 PIGGQ5H8A4 983 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 C6orf10Q5SRN2 563 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 ARPINQ7Z6K5 226 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 RPS19BP1Q86WX3 136 aaKnown RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 NATD1Q8N6N6 113 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 ZFP62Q8NB50 900 aaPredicted RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 OR8J3Q8NGG0 315 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 PSMA8Q8TAA3 256 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 RNASE6Q93091 150 aaKnown RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 EXOSC8Q96B26 276 aaKnown RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 CNRIP1Q96F85 164 aaPredicted RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 CLPTM1LQ96KA5 538 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 ZNF681Q96N22 645 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 ANKRD27Q96NW4 1050 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 CGREF1Q99674 301 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 HOPXQ9BPY8 73 aaPredicted RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 CNPPD1Q9BV87 410 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 IKZF5Q9H5V7 419 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 IL1RL2Q9HB29 575 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 SPAG4Q9NPE6 437 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 SLC35C2Q9NQQ7 365 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 SIRT3Q9NTG7 399 aaPredicted RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 ACSS1Q9NUB1 689 aaPredicted RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 GID8Q9NWU2 228 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 CMTM6Q9NX76 183 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 SH3BP4Q9P0V3 963 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 HCN3Q9P1Z3 774 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 TMEM181Q9P2C4 612 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 UTS2RQ9UKP6 389 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 CDC14AQ9UNH5 594 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 RRP15Q9Y3B9 282 aaKnown RBP9.23□□□□□ -0.93
ATG4B-212ENST00000430617 ROS1P08922 2347 aa9.23□□□□□ -0.93
ATG4B-212ENST00000430617 GLOD5A6NK44 160 aa9.22□□□□□ -0.93
ATG4B-212ENST00000430617 WASHC1A8K0Z3 465 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms