RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 MRGPREQ86SM8 312 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 C11orf74Q86VG3 221 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 COX18Q8N8Q8 333 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 TSTD1Q8NFU3 115 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 OR9A4Q8NGU2 314 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 COX4I2Q96KJ9 171 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 DACH2Q96NX9 599 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 SATB2Q9UPW6 733 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 STX11O75558 287 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 SCG5P05408 212 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 RPS4Y1P22090 263 aaKnown RBP23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 CDH3P22223 829 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 BMP8BP34820 402 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 SPHARQ15513 63 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 RNLSQ5VYX0 342 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 TMEM163Q8TC26 289 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 TMEM255BQ8WV15 326 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 MND1Q9BWT6 205 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 MMP27Q9H306 513 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 HHATLQ9HCP6 504 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 SLC2A4RGQ9NR83 387 aa23.84■■□□□ 1.41
SMARCD3-203ENST00000392811 RAB15P59190 212 aa23.83■■□□□ 1.41
SMARCD3-203ENST00000392811 NRMQ8IXM6 262 aa23.83■■□□□ 1.41
SMARCD3-203ENST00000392811 ARHGEF39Q8N4T4 335 aa23.83■■□□□ 1.41
SMARCD3-203ENST00000392811 NANOGP1Q8N7R0 232 aa23.83■■□□□ 1.41
SMARCD3-203ENST00000392811 C19orf47Q8N9M1 422 aaKnown RBP23.83■■□□□ 1.41
SMARCD3-203ENST00000392811 OR52I1Q8NGK6 324 aa23.83■■□□□ 1.41
SMARCD3-203ENST00000392811 GPR151Q8TDV0 419 aa23.83■■□□□ 1.41
SMARCD3-203ENST00000392811 STACQ99469 402 aa23.83■■□□□ 1.41
SMARCD3-203ENST00000392811 TTYH1Q9H313 450 aaPredicted RBP23.83■■□□□ 1.41
SMARCD3-203ENST00000392811 KCNE5Q9UJ90 142 aa23.83■■□□□ 1.41
SMARCD3-203ENST00000392811 SLC7A7Q9UM01 511 aa23.83■■□□□ 1.41
SMARCD3-203ENST00000392811 IGHV1OR15-9A0A0B4J2B8 117 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 KRBA1A5PL33 1030 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 PIP5K1CO60331 668 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 DBIP07108 87 aaKnown RBP23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 FPR3P25089 353 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 GPR4P46093 362 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 RPS3AP61247 264 aaKnown RBP23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 GAS6Q14393 721 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 TIMM50Q3ZCQ8 353 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 CLEC12AQ5QGZ9 265 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 ZCCHC12Q6PEW1 402 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 PAQR6Q6TCH4 344 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 MBOAT2Q6ZWT7 520 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 AMER2Q8N7J2 671 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 AVL9Q8NBF6 648 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 CTHRC1Q96CG8 243 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 LMAN1LQ9HAT1 526 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 TBCCD1Q9NVR7 557 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 TESQ9UGI8 421 aaKnown RBP23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 DIMT1Q9UNQ2 313 aaKnown RBP23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 GPR52Q9Y2T5 361 aa23.83■■□□□ 1.4
SMARCD3-203ENST00000392811 NPIPA5A0A0B4J1W7 369 aa23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 CHURC1-FNTBB4DL54 471 aa23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 NPIPA7E9PJI5 369 aa23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 NPIPA8P0DM63 369 aa23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 GNSP15586 552 aa23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 SOX3P41225 446 aa23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 MAP3K8P41279 467 aa23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 STAT5AP42229 794 aa23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 SMAD4Q13485 552 aaKnown RBP23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 DGAT2L6Q6ZPD8 337 aa23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 MCATQ8IVS2 390 aaKnown RBP23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 GALNT12Q8IXK2 581 aa23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 DEFB119Q8N690 84 aa23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 PHF7Q9BWX1 381 aaPredicted RBP23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 RHBDL2Q9NX52 303 aa23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 CCDC59Q9P031 241 aaKnown RBP23.82■■□□□ 1.4
SMARCD3-203ENST00000392811 SLC9B1P1A6NJY1 282 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 PEX12O00623 359 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 KLF4O43474 513 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 CHST10O43529 356 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 KIAA0513O60268 411 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 OCM2P0CE71 109 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 OCMP0CE72 109 aaPredicted RBP23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 PRG2P13727 222 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 RNF144AP50876 292 aaPredicted RBP23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 FIGNL1Q6PIW4 674 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 SLC36A4Q6YBV0 504 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 SNX29P2Q8IUI4 249 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 ZNF687Q8N1G0 1237 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 PROKR2Q8NFJ6 384 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 SLC38A2Q96QD8 506 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 CDADC1Q9BWV3 514 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 NXF2Q9GZY0 626 aaKnown RBP23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 KNL1Q8NG31 2342 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 GPX5O75715 221 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 RAB36O95755 333 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 WNT1P04628 370 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 HBQ1P09105 142 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 IFI6P09912 130 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 GABRA3P34903 492 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 MRPL2Q5T653 305 aaKnown RBP23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 RANBP3LQ86VV4 465 aaPredicted RBP23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 POGLUT1Q8NBL1 392 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 TOR1AIP2Q8NFQ8 470 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 RBCK1Q9BYM8 510 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 A3GALT2U3KPV4 340 aa23.81■■□□□ 1.4
SMARCD3-203ENST00000392811 GXYLT2A0PJZ3 443 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms