RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CSO75390 466 aaKnown RBP18.85■□□□□ 0.61
VSX1-202ENST00000376709 STX11O75558 287 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 OR5F1O95221 314 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 SCG5P05408 212 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 ST6GAL1P15907 406 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 OMPP47874 163 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 IFITM3Q01628 133 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 DOC2BQ14184 412 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 DECR1Q16698 335 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 CLEC12AQ5QGZ9 265 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 RASSF6Q6ZTQ3 369 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 ATCAYQ86WG3 371 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 RBM12BQ8IXT5 1001 aaKnown RBP18.85■□□□□ 0.61
VSX1-202ENST00000376709 ZNF687Q8N1G0 1237 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 GPR151Q8TDV0 419 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 PIK3R3Q92569 461 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 SLC38A2Q96QD8 506 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 ZNF350Q9GZX5 532 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 SEMA6CQ9H3T2 930 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 FAM60AQ9NP50 221 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 GPR27Q9NS67 375 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 DAPK2Q9UIK4 370 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 POMT2Q9UKY4 750 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 LSM2Q9Y333 95 aaKnown RBP18.85■□□□□ 0.61
VSX1-202ENST00000376709 CENPVL1A0A0U1RR11 272 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 METTL15A6NJ78 407 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 RDH16O75452 317 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 UBXN7O94888 489 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 THBS1P07996 1170 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 CDH3P22223 829 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 SOX3P41225 446 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 C1DQ13901 141 aaKnown RBP18.84■□□□□ 0.61
VSX1-202ENST00000376709 EXOSC7Q15024 291 aaKnown RBP18.84■□□□□ 0.61
VSX1-202ENST00000376709 SSX1Q16384 188 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 PRICKLE4Q2TBC4 344 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 LRIT3Q3SXY7 679 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 NRMQ8IXM6 262 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 ZNF619Q8N2I2 560 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 OR8D4Q8NGM9 314 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 TMEM255BQ8WV15 326 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 LRRC61Q9BV99 259 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 PRRG3Q9BZD7 231 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 DUSP22Q9NRW4 184 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 GPR52Q9Y2T5 361 aa18.84■□□□□ 0.61
VSX1-202ENST00000376709 EEF1A1P68104 462 aaKnown RBP18.83■□□□□ 0.61
VSX1-202ENST00000376709 C19orf48Q6RUI8 117 aa18.83■□□□□ 0.61
VSX1-202ENST00000376709 RANBP3LQ86VV4 465 aaPredicted RBP18.83■□□□□ 0.61
VSX1-202ENST00000376709 TMEM163Q8TC26 289 aa18.83■□□□□ 0.61
VSX1-202ENST00000376709 PPP1R14BQ96C90 147 aa18.83■□□□□ 0.61
VSX1-202ENST00000376709 DACH2Q96NX9 599 aa18.83■□□□□ 0.61
VSX1-202ENST00000376709 TAPBPLQ9BX59 468 aa18.83■□□□□ 0.61
VSX1-202ENST00000376709 MAT2BQ9NZL9 334 aa18.83■□□□□ 0.61
VSX1-202ENST00000376709 SLC7A7Q9UM01 511 aa18.83■□□□□ 0.61
VSX1-202ENST00000376709 DOLKQ9UPQ8 538 aa18.83■□□□□ 0.61
VSX1-202ENST00000376709 SATB2Q9UPW6 733 aa18.83■□□□□ 0.61
VSX1-202ENST00000376709 SNTNA6NMZ2 147 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 CHURC1-FNTBB4DL54 471 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 KIAA0513O60268 411 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 RAB36O95755 333 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 THY1P04216 161 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 FPR3P25089 353 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 NUDT1P36639 197 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 GPR4P46093 362 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 LIMK1P53667 647 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 EFNB1P98172 346 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.83■□□□□ 0.6
VSX1-202ENST00000376709 SLC36A4Q6YBV0 504 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 DEFB119Q8N690 84 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 NANOGP1Q8N7R0 232 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 PROKR2Q8NFJ6 384 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 OR52I1Q8NGK6 324 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 OR9A4Q8NGU2 314 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 ORAI3Q9BRQ5 295 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 POLR2J2Q9GZM3 115 aaKnown RBP18.83■□□□□ 0.6
VSX1-202ENST00000376709 RACGAP1Q9H0H5 632 aa18.83■□□□□ 0.6
VSX1-202ENST00000376709 CCDC59Q9P031 241 aaKnown RBP18.83■□□□□ 0.6
VSX1-202ENST00000376709 DIMT1Q9UNQ2 313 aaKnown RBP18.83■□□□□ 0.6
VSX1-202ENST00000376709 TMEM265A0A087WTH1 108 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 FUOMA2VDF0 154 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 DSCR3O14972 297 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 DBIP07108 87 aaKnown RBP18.82■□□□□ 0.6
VSX1-202ENST00000376709 GNSP15586 552 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 RAB38P57729 211 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 SMAD2Q15796 467 aaKnown RBP18.82■□□□□ 0.6
VSX1-202ENST00000376709 MAPK14Q16539 360 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 TRIM16LQ309B1 348 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 MBOAT2Q6ZWT7 520 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 GALNT12Q8IXK2 581 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 C19orf47Q8N9M1 422 aaKnown RBP18.82■□□□□ 0.6
VSX1-202ENST00000376709 OSTF1Q92882 214 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 STACQ99469 402 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 TEX12Q9BXU0 123 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 HHATLQ9HCP6 504 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 IGHV1OR15-9A0A0B4J2B8 117 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 KPNA4O00629 521 aaPredicted RBP18.82■□□□□ 0.6
VSX1-202ENST00000376709 PRODHO43272 600 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 OR10H2O60403 315 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 CT62P0C5K7 136 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 PTNP21246 168 aa18.82■□□□□ 0.6
VSX1-202ENST00000376709 TBC1D25Q3MII6 688 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms