RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CTHP32929 405 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SOX3P41225 446 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 GPR50Q13585 617 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 DEFB115Q30KQ5 88 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 RPS10P5Q9NQ39 176 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 OR2S2Q9NQN1 319 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 CD300AQ9UGN4 299 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 CYP8B1Q9UNU6 501 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 FBXO7Q9Y3I1 522 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 OR6C6A6NF89 314 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 HHLA1C9JL84 531 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 GAPDHSO14556 408 aaPredicted RBP7.24□□□□□ -1.25
SF3B3-201ENST00000302516 LEFTY1O75610 366 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SPDEFO95238 335 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SUSD1Q6UWL2 747 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SPATC1Q76KD6 591 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 NLRP8Q86W28 1048 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 OR9A4Q8NGU2 314 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 TBC1D20Q96BZ9 403 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 B4GALT6Q9UBX8 382 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 PLAGL1Q9UM63 463 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 LEFTY2O00292 366 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 DOC2AQ14183 400 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 TATDN3Q17R31 274 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 GAREM2Q75VX8 874 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 PRSS58Q8IYP2 241 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 TMEM174Q8WUU8 243 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 TM9SF4Q92544 642 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SACM1LQ9NTJ5 587 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SLC6A14Q9UN76 642 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 ETV7Q9Y603 341 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 LAMB2P55268 1798 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 GLOD5A6NK44 160 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 NUDT19A8MXV4 375 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 DCNP07585 359 aaKnown RBP7.24□□□□□ -1.25
SF3B3-201ENST00000302516 MSR1P21757 451 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 ETV3P41162 512 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 ETV1P50549 477 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SRPXP78539 464 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 PLBD1Q6P4A8 553 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 LEG1Q6P5S2 330 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 COMMD6Q7Z4G1 85 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 CSNK1A1LQ8N752 337 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 DBF4BQ8NFT6 615 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 OR52E2Q8NGJ4 325 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 NT5C3BQ969T7 300 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SLC25A44Q96H78 314 aaPredicted RBP7.24□□□□□ -1.25
SF3B3-201ENST00000302516 FCRL1Q96LA6 429 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 SORCS2Q96PQ0 1159 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF416Q9BWM5 594 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 STRA6Q9BX79 667 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 MFFQ9GZY8 342 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 GPR137BO60478 399 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 F2P00734 622 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 HBQ1P09105 142 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 FUT4P22083 530 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 ECI1P42126 302 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 UAP1L1Q3KQV9 507 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 EID2Q8N6I1 236 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 OR6T1Q8NGN1 323 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 TMEM163Q8TC26 289 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 TMEM19Q96HH6 336 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF419Q96HQ0 510 aaPredicted RBP7.24□□□□□ -1.25
SF3B3-201ENST00000302516 WDR92Q96MX6 357 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 OR8D2Q9GZM6 311 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 NMNAT1Q9HAN9 279 aaPredicted RBP7.24□□□□□ -1.25
SF3B3-201ENST00000302516 MAN2C1Q9NTJ4 1040 aa7.24□□□□□ -1.25
SF3B3-201ENST00000302516 A0A0A6YYH2 397 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 A6NJ64 397 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 EEF1E1-BLOC1S5C9J1V9 151 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 C11orf98E9PRG8 122 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 SLC34A2O95436 690 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 RPS17P08708 135 aaKnown RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 LCTLQ6UWM7 567 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 UEVLDQ8IX04 471 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 PARP16Q8N5Y8 322 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ARL5BQ96KC2 179 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 TMEM100Q9NV29 134 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 GIMAP2Q9UG22 337 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 BCORQ6W2J9 1755 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ANKRD28O15084 1053 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ACP2P11117 423 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ARRB1P49407 418 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 AKR1C2P52895 323 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 WDR88Q6ZMY6 472 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 LRRC56Q8IYG6 542 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 CCDC116Q8IYX3 515 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ADGRG5Q8IZF4 528 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 SERINC2Q96SA4 455 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 RBCK1Q9BYM8 510 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 STRADBQ9C0K7 418 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ACTR10Q9NZ32 417 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 RIMS3Q9UJD0 308 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 A3GALT2U3KPV4 340 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 DUX1O43812 170 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 THEGLP0DJG4 465 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 PKLRP30613 574 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 ETV4P43268 484 aa7.23□□□□□ -1.25
SF3B3-201ENST00000302516 WDR5P61964 334 aaKnown RBP7.23□□□□□ -1.25
SF3B3-201ENST00000302516 WDR77Q9BQA1 342 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms