RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 RMND5AQ9H871 391 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 MRGBPQ9NV56 204 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 QPCTLQ9NXS2 382 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 KLRF1Q9NZS2 232 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 ABCG2Q9UNQ0 655 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 TENM4Q6N022 2769 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 GCN1Q92616 2671 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 GXYLT2A0PJZ3 443 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 DUXAA6NLW8 204 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 FAM166BA8MTA8 275 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 RFXANKO14593 260 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 ICOSLGO75144 302 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 KCNK2O95069 426 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 CPSF4O95639 269 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 CYP4B1P13584 511 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 EVI2BP34910 448 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 PTGDSP41222 190 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 MASP1P48740 699 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 MAN2A2P49641 1150 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 KCNK10P57789 538 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 POU6F2P78424 691 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 CMPK2Q5EBM0 449 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 SAXO2Q658L1 398 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 DESI1Q6ICB0 168 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 C6orf120Q7Z4R8 191 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 TMEM251Q8N6I4 163 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 OR52N2Q8NGI0 321 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 FAM110BQ8TC76 370 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 ADAMTS15Q8TE58 950 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 NEURL3Q96EH8 262 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 JSRP1Q96MG2 331 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 ZNF317Q96PQ6 595 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 SLC35A5Q9BS91 424 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 YIPF4Q9BSR8 244 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 BTBD2Q9BX70 525 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 PLSCR2Q9NRY7 297 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 WIF1Q9Y5W5 379 aa13.5□□□□□ -0.25
CDC42BPB-209ENST00000634889 CCDC154A6NI56 674 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 SNPHO15079 494 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 AGR2O95994 175 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 IGHG3P01860 377 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 NGFRP08138 427 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 ZCCHC18P0CG32 403 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 NCF2P19878 526 aaPredicted RBP13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 CHI3L1P36222 383 aaPredicted RBP13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 MAGEA5P43359 124 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 TXNL4AP83876 142 aaKnown RBP13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 TIGD2Q4W5G0 525 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 FNDC7Q5VTL7 733 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 ARHGAP11AQ6P4F7 1023 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 BLOC1S3Q6QNY0 202 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 OR1J4Q8NGS1 313 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 CDS1Q92903 461 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 DTNBP1Q96EV8 351 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 CHMP6Q96FZ7 201 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 ITCHQ96J02 903 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 SLC35G5Q96KT7 338 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 OR7D2Q96RA2 312 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 INPP5KQ9BT40 448 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 TMEM120AQ9BXJ8 343 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 ZNF385DQ9H6B1 395 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 HHATLQ9HCP6 504 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 GALNT9Q9HCQ5 603 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 SERHLQ9NQF3 203 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 CCDC167Q9P0B6 97 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 C15orf41Q9Y2V0 281 aa13.49□□□□□ -0.25
CDC42BPB-209ENST00000634889 SUSD5O60279 629 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 FADS1O60427 444 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 WISP2O76076 250 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 UTS2O95399 124 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 AK1P00568 194 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 IGKV1D-16P01601 117 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 STSP08842 583 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 RFPL3SP0C7P2 107 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 MATN1P21941 496 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 CDKN2CP42773 168 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 MAGEA8P43361 318 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 RFX3P48380 749 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 CLK3P49761 638 aaKnown RBP13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 SLC10A1Q14973 349 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 DCST2Q5T1A1 773 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 TIGD3Q6B0B8 471 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 CGB2Q6NT52 195 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 ZNF621Q6ZSS3 439 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 FUNDC1Q8IVP5 155 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 CLEC4FQ8N1N0 589 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 PRR7Q8TB68 274 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 VPS33AQ96AX1 596 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 OTUB1Q96FW1 271 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 PHF12Q96QT6 1004 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 UBQLN3Q9H347 655 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 SERHL2Q9H4I8 314 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 ACKR4Q9NPB9 350 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 KLHL14Q9P2G3 628 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 ZNF835Q9Y2P0 537 aa13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 HELZ2Q9BYK8 2649 aaKnown RBP13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 NUP214P35658 2090 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPB-209ENST00000634889 RELNP78509 3460 aa13.47□□□□□ -0.25
CDC42BPB-209ENST00000634889 A0A1B0GVC2 190 aa13.47□□□□□ -0.25
CDC42BPB-209ENST00000634889 CDC40O60508 579 aaKnown RBP eCLIP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms