RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 PMPCAQ10713 525 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 TSPAN31Q12999 210 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 UBE2UQ5VVX9 321 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 PGBD2Q6P3X8 592 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 PLBD1Q6P4A8 553 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 FAM111BQ6SJ93 734 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMEM64Q6YI46 380 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 NCCRP1Q6ZVX7 275 aaPredicted RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 FGD2Q7Z6J4 655 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 Q8N402 240 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 CSNK1A1LQ8N752 337 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 GAL3ST3Q96A11 431 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMEM246Q9BRR3 403 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 CDCA4Q9BXL8 241 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 ACTRT3Q9BYD9 372 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 GPATCH2Q9NW75 528 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 PMF1-BGLAPU3KQ54 211 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR5K4A6NMS3 321 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 GPR75O95800 540 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 MT-ND5P03915 603 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 STAT5AP42229 794 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 GRK6P43250 576 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 VSX2P58304 361 aaPredicted RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 DESI1Q6ICB0 168 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF761Q86XN6 746 aaPredicted RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 FAM26EQ8N5C1 309 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZG16BQ96DA0 208 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 COQ7Q99807 217 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR52D1Q9H346 318 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 NEK6Q9HC98 313 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SMURF1Q9HCE7 757 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 EXTL2Q9UBQ6 330 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 CA5BQ9Y2D0 317 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 POLR1DQ9Y2S0 133 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SBF2Q86WG5 1849 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR6C74A6NCV1 312 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SLC22A31A6NKX4 558 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 A8MVJ9 347 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMEM150CB9EJG8 249 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 J3QLW9 94 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 LCMT2O60294 686 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF19P17023 458 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 BSGP35613 385 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 MAP2K3P46734 347 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 MVDP53602 400 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 MAP4K2Q12851 820 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 RPE65Q16518 533 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF181Q2M3W8 571 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 DEFB110Q30KQ9 67 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 CEP78Q5JTW2 689 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 C6orf132Q5T0Z8 1188 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 C6orf183Q5T699 404 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 ACSM5Q6NUN0 579 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 ADAMTSL4Q6UY14 1074 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 CAMKMTQ7Z624 323 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 TIGD4Q8IY51 512 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 PARP16Q8N5Y8 322 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 TSACCQ96A04 125 aaPredicted RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 TBC1D20Q96BZ9 403 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 FAM46AQ96IP4 442 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 SAMD8Q96LT4 415 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 NEURL2Q9BR09 285 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 EXO1Q9UQ84 846 aaKnown RBP5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 N6AMT1Q9Y5N5 214 aa5.3□□□□□ -1.56
SYNCRIP-204ENST00000616122 HYKKA2RU49 373 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GPX5O75715 221 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 CSTAP01040 98 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 HLA-DQA2P01906 255 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 PEPDP12955 493 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 CAPZA2P47755 286 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 MAN2A2P49641 1150 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 RAB14P61106 215 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 POU6F2P78424 691 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 KIR2DS3Q14952 304 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 IRF4Q15306 451 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 SYT14P1Q58G82 188 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 SNAP47Q5SQN1 464 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 FRRS1Q6ZNA5 592 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 LRRC56Q8IYG6 542 aaPredicted RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ANKRD53Q8N9V6 530 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 OR4F15Q8NGB8 312 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF563Q8TA94 476 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GATAD2BQ8WXI9 593 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 KLHDC7BQ96G42 594 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 CACNG6Q9BXT2 260 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 BCL2L10Q9HD36 194 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 PTPRFP10586 1907 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GXYLT2A0PJZ3 443 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 LRIT2A6NDA9 550 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZAR1LA6NP61 321 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 MOSPD3O75425 235 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 CD2P06729 351 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 GNSP15586 552 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 TEAD1P28347 426 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 RPS19P39019 145 aaKnown RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 CSTF1Q05048 431 aaKnown RBP5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 PDE7AQ13946 482 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 ZNF750Q32MQ0 723 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 TMEM52BQ4KMG9 183 aa5.29□□□□□ -1.56
SYNCRIP-204ENST00000616122 FLYWCH1Q4VC44 716 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms